Garra rufa (doctor fish): 141342942
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Entry
141342942 CDS
T11039
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00900
Terpenoid backbone biosynthesis
grf01100
Metabolic pathways
Module
grf_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
141342942 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
grf01006
]
141342942 (fdps)
Enzymes [BR:
grf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
141342942 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
141342942 (fdps)
Prenyltransferases [BR:
grf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
141342942 (fdps)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Ntox46
Motif
Other DBs
NCBI-GeneID:
141342942
NCBI-ProteinID:
XP_073703630
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All DBs
Position
9:31475993..31481010
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AA seq
359 aa
AA seq
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MGDSRCSNGVQQKGKMFSDAQLFDLEFEKLVSELTEQDFTDPVLTDALNRLREVLRYNAP
GGKRNRGLSVIGSLRELVSSSELPPDEVHRALLVGWCIELLQAFFLVADDIMDASLTRRG
QPCWYKKEGIGLDAINDAFLLEGAIYRLLRRHCRGQRYYVHLLELFTETSFQTELGQTLD
LMTAPPHKIDLDRFTMERYKAIVKYKTAFYSFYLPVAAAMYMAGIENETEHNNAKTILLE
MGEFFQIQDDYLDCYGDPAVTGKIGTDIQDNKCSWLVVTALGIMTPEQRAELEACYGRSD
AESVERVKALYDTLEMPIRYHQHEEESYRRLQKLIQLHAKNLPHAVFLNFAKKIYKRNK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacagcaggtgcagtaacggtgtccagcagaaaggcaagatgttttcagatgct
cagctctttgatttggagtttgaaaagttggtgtccgaacttacagagcaggacttcact
gatccagttctcactgatgccctcaacagactcagagaggtgcttcggtataatgctcct
ggaggcaagagaaaccgaggtttgtctgtgattggatctctacgggagctggtctcttct
tctgaactgccacctgatgaagttcacagagcccttttggttggatggtgcattgaactg
cttcaggcatttttcttggtggctgatgacattatggatgcatccctgacaagaaggggt
caaccctgttggtataagaaggaaggtattggtctggatgccattaatgatgcttttctc
ctggagggggcgatctaccgcctgcttcgcagacattgcagaggacagcgctactatgtc
catctgcttgagctttttacagagacctctttccagacagagctaggtcagactttagat
ctgatgacggcacctccacacaaaattgaccttgatcgcttcacaatggagaggtacaaa
gccattgtgaaatacaagaccgcattctactccttttatctacctgtagctgcagccatg
tacatggcagggattgaaaatgagactgaacacaacaatgctaaaacaattttacttgag
atgggagagttctttcagattcaggatgactacctggattgttatggtgaccccgctgtg
actggaaagattggcacggatatccaggacaacaaatgcagctggctggtggtgactgca
ctgggcatcatgacacctgaacagagggcagaacttgaggcgtgttacggacgtagtgat
gctgaaagtgtcgaacgggtcaaggctttgtatgatactctggaaatgcctatccgatat
catcaacatgaggaggagagctatcgccgccttcaaaaactcattcagcttcatgccaag
aatctgcctcatgctgtgtttcttaattttgccaagaaaatatataaaagaaacaaataa
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