Garra rufa (doctor fish): 141342944
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Entry
141342944 CDS
T11039
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141342944 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141342944 (prpf31)
Spliceosome [BR:
grf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
141342944 (prpf31)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
141342944
NCBI-ProteinID:
XP_073703632
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Position
9:complement(19893239..19898938)
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AA seq
509 aa
AA seq
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MSLADELLADLEEAAEEEDGLYGGGEGGESDGEPGENQADGGLEDIQEEMEVDYSGTESV
TSIAKLRHSKPFSEIMEKIGHYVGNQRKNSDVSGPVESDPEYRLIVAANNLTVEIDNELN
IIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNSLEKCKNNETLQQILTNATIMVVS
VTASTTQGTMLGEDELQRLEEACDMALELNQSKHRIYEYVESKMSFIAPNLSIIVGASTA
AKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDLR
RKAARLVAAKCTLASRVDSFHESTDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAA
EKKVAEANQKYFSNMAEFLKVKREKDDKV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagacgagttgcttgccgacttggaggaggcagcagaagaagaggacggg
ctttatggcggtggagaagggggtgagagtgatggggaacccggggagaatcaagccgat
ggaggtctggaggacatacaggaggagatggaggtggattatagtgggacggagagtgtc
acatccatagcaaaactaagacacagcaagccattttctgaaatcatggagaaaattggt
cattatgttggaaatcaacgtaagaattcagatgtgtctggacctgttgagtcagaccca
gagtacagactcattgttgccgccaacaatctaacagtggaaattgacaatgaacttaat
atcattcacaagtttgttcgtgacaagtattccaaaaggtttcctgaacttgagtctctg
gtgccaaatgcactagactatatcagaactgttaaggagctgggcaacagtctagagaaa
tgtaaaaataatgagaccctccagcagattctgactaatgctactatcatggtggtcagt
gtcacagcctcaaccacacaaggaacaatgcttggtgaagatgagctccagcgattggag
gaggcatgtgacatggcccttgagctcaaccagtcaaaacacaggatctatgaatatgtg
gaatccaagatgtcatttatcgctccgaatctttcaattattgttggagcttcaactgct
gccaagattatgggtgttgctggtggactgactaacctgtccaagatgcctgcgtgtaat
ctgatgttgctgggagctcagcggaggacgctgtctggattcagcagcacatccctgctg
ccccacactggctacatctaccactgtgatgtagtgcagtctctgcctccagatctaagg
agaaaagcagctcgtctggttgcagctaaatgcactctggcttcacgtgtggacagtttt
cacgagagcacagacggcaaggttggttatgacttgaaggaagagattgagcgaaagttt
gataaatggcaggagcctccaccagtcaagcaggtgaagcctcttccagctcccctagat
ggacagaggaagaagagaggaggaagaaggtatcgtaagatgaaagagagactgggtctg
acagaaatcaggaaacatgccaacagaatgacatttgcagagatcgaggatgatgcttat
caagaggatctgggcttcagtctcggtcagctgggaaagtctggcagcggcagggtcaga
caagctcaggtcaacgactccaccaaggccagaatatccaaatccttacagcggacactg
cagaagcagagcatgacgtatggtggcaagtccactgtcagagaccgatcatctggaacc
agctccagtgtggccttcactcctttacaggggttggagattgtgaacccgcaggctgca
gagaagaaggtggctgaagccaatcagaagtacttctccaacatggccgagttcctcaag
gtcaagcgcgagaaggatgataaagtgtga
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