Garra rufa (doctor fish): 141342970
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Entry
141342970 CDS
T11039
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141342970 (irx1a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141342970 (irx1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
141342970
NCBI-ProteinID:
XP_073703662
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Position
9:43937490..43941795
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AA seq
457 aa
AA seq
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MSFPQLGYPQYLSASQAVYGGDRPGVLTPSSRGGSAEIGGSASAAAAAVSSVLGMYPYAH
NYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARPKN
ATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTW
GARSKEDEDGNIFGSDNEGDAEKNEDEEEIDLESIDIDKIDDNDGDQSNEEDEEKRGELE
SLQEKRHALALQAHEAFEKSKSNAISVSKEPSDGNNNNTRVLSPGRPGGFQVPVSNKPKI
WSLAETATSPDSAQKPTSPSVPATHAGAHPAFLPSHGLYTCQIGKFHNWTNGAFLGQNSL
LNVRSFLGVNQHHHNHPVHSQQQQQQQQPTSVVVSSMAAVNSEKAPEDLSPKHIDRENVL
RNESPTQPLKSSFRPLHDSPRNQQESTQRVLTALSSA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctgggctacccgcagtatttaagtgcctcccaggcggtgtacgga
ggcgatcgcccgggagtgctgactccgtcgtcccgcggagggagcgccgagatcggggga
agcgcgtcggcggcggccgctgccgtgtcctcggtgctgggcatgtacccgtacgcacac
aactacagcgcctttctgccttacaccagcgccgatctggctcttttctcccagatgggc
tctcagtatgatttaaaagacagtcctggcgttcaccccgccagctttgctgcccacacg
agccctgccttctacccctacggtcagttccagtacggagacccagccaggcctaaaaac
gccacacgggagagtaccagcactctgaaggcctggctcaacgagcacaggaaaaacccc
taccccaccaaaggcgagaagatcatgctggccatcatcaccaagatgaccctcacccaa
gtgtccacctggttcgccaacgccagacggagactcaagaaggagaacaaggtgacgtgg
ggcgccagaagcaaagaggacgaagacggcaacatttttggcagcgacaacgagggcgac
gccgagaagaacgaagacgaagaggaaatagatttggagagcatagatatcgacaagatc
gacgacaacgacggggatcaaagcaacgaggaggatgaggaaaagcgcggggagctcgag
agcctgcaggaaaaacggcacgcgctcgcgctgcaggctcacgaggccttcgagaaatcc
aaatccaacgccatttcggtcagcaaagagccgtcggacggtaacaacaacaacaccagg
gtcctgtcgccgggtcggccgggaggctttcaggttccggttagcaataagcccaaaata
tggtccttagcagaaaccgccaccagtccagatagcgctcagaaacctacgtcaccctcg
gttcccgccactcacgcgggcgcgcacccggccttcctgcccagccacggactgtacacg
tgccagattgggaagttccacaattggacaaatggcgcttttctgggccaaaactccctg
ctgaacgtccgatcgttcttgggcgtcaatcagcatcaccataatcatcccgttcactca
cagcagcaacagcaacagcagcagcccacgtcggtggtggtgtcatcgatggcagccgtc
aacagtgagaaggcgccagaggacctgagtccaaaacacatagatcgggaaaacgtcctc
agaaatgaatcaccaacgcaacctttaaaatcatcatttcgtcctcttcacgacagcccc
agaaaccagcaggaatcgacacagagggtcctcacagctctctcttccgcttga
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