Garra rufa (doctor fish): 141342971
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Entry
141342971 CDS
T11039
Symbol
dennd3b
Name
(RefSeq) DENN domain-containing protein 3
KO
K20162
DENN domain-containing protein 3
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141342971 (dennd3b)
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141342971 (dennd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40
uDENN
dDENN
WDR55
WD40_2
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_EML
DUF5074
Motif
Other DBs
NCBI-GeneID:
141342971
NCBI-ProteinID:
XP_073703664
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All DBs
Position
9:20755018..20775785
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AA seq
1250 aa
AA seq
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MADGLPSRFLEACVVVGPANDKLKELSQFLLQVNGSPLPLLDPEVLQVHAPQFVSKESLS
EPAVRNFFIKKKNDKPVFKAGNPKEETTEDVRVPKDLDLVALPQLCFPGGLQITKDQKDE
QFHFLVFTDMFGNQSHGVVLQFSRSIQEGMQNGHRHLYRSPRLYIAYAICVISKHPYYNA
LRDCLSSLLGQLKICQMADMEEQVKEFSAKLALVTVPPPGQLYVVFNLRPLTIVLPSRED
KNHPVIDLDLHLPLLCFKTRELLQIIASILTEQRMVFFSSDWAKLTLIVECFMLYIWPLH
WQHPLVPILSQQMLDFVMAPTAFLMGCHISHYEEVAKLTDDLILINIDEGTVSCSGCHYI
DVPDTPQAAAEHFKCRRKGLQLHYDLEMVHQRSCCNLNELRMQRRQWQHSLNLDIQNITL
ELIVNMFRDVSDYLNHEHRVFNTDEFLKTREPEDQPFYKKVLETHIFHSFLKERLNGKID
KFTQMDLNTQTEDKRLSRSLDYSRRPTIKEIKILRNGSLDSGLSKRLGSSLPDLDNKKHL
NVLKQLSPTKILPEKSMITPVRPVKNFQLPDFPSPLNFTNILHYFGDLILQLNKAISASP
AVDSFLLARYFYLRGLINMLCSKRLDALSDFQNLYKTDIEIFPGELVKTLADSLQIEERA
QAEKRPELRWLICQVKKNENSEHVESDCHVRKFELPKTPMQLEEFVKCTQQSGIVRDMAT
SKRLFEALTVGGPKHINPEMFKVFYTFWKQAEAQDIDLPVEVLEHLDNNECVYKLSSSVK
TSYGVGKIAMTQKRLFLLNTCRHGYVEITKFRDIEEVKISAASFSLLRIPSLKIKNSLRQ
EIFEANLKSECELWNLMVKEMLAGRMMADNHKDPQHVQQALTNVLLMDAVVGCVQSQKAV
CAASKLAYYEKQRQEVPIIIPRPTAEALKHKINPSQNMTNPQSVDALLYTPGQLTFPDRD
VDGNPKLWCALSCGKVVVFDAVSWSLKQNCIHLGESRLNCMMGLDQEQVWIGSQDVIYII
NTRSMLCHKLLTEHHGEVTDFALEKLNTENRSSQAQVYSCSADGTVIVWLVPSLKVKRQF
HLSCDRLQSIQVYNDSLWCGARDCVMKLSPSGTLLCKISLPDDVKTTSFSRVTLLMEKRQ
IWTSFTDSAELCIWDSSDPVKPPNRVTLPNCSGVTCMIRVKDQVWIGCSGGSGLSKVVGK
IFVLDSESLKVEKELEAHEDTVQALFSAEDRYILSGSAKRDGRIAIWRVD
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtctgccttcaagattcctggaagcgtgtgtcgttgttggacctgcaaat
gataaactaaaagagctgtcccagtttttgctgcaggtgaatggaagtcctttgcctctg
ctcgatcccgaggttttgcaggtccatgcaccccagtttgtgtctaaagagagtctcagt
gaaccagctgtgagaaacttcttcattaagaagaaaaatgataagcctgtttttaaggct
ggaaaccccaaagaagaaaccacagaggatgttcgtgttcccaaagacctggatctggtg
gctctgccacaactctgctttccaggtgggcttcagataactaaggaccaaaaggatgaa
cagtttcacttcctagtcttcactgacatgtttggaaaccagtctcatggagtagttctc
cagttctctagatcaatacaggaaggaatgcagaatggacaccggcacttgtacaggtct
ccacgactctacattgcttatgcaatatgtgttatatcaaaacacccatattacaatgct
ctcagggactgtctgtctagtctcttaggtcagctcaaaatctgtcaaatggctgatatg
gaagagcaagtgaaggagttctctgctaaattggctctagttacagttcctcctcctggt
cagctgtatgtggtgttcaacttacgacctctgacgattgtccttccatccagagaagat
aaaaatcatcctgttattgacctggacttacatctcccgctcctctgcttcaagaccaga
gagctgctgcagattatagccagtatactcacagagcagcgtatggtgttcttttcttcg
gactgggccaaactgactctgatcgtagaatgtttcatgctgtatatttggcccctgcac
tggcagcacccactggtgcctatactgtcccaacagatgcttgactttgttatggcacca
actgccttcctcatgggatgccacatcagccactatgaggaagttgccaagttaactgat
gacctgattctgatcaacattgatgagggaaccgtgtcctgctctggctgtcattacatt
gatgtcccagacaccccgcaggcagctgctgagcatttcaagtgtcgaaggaaaggtctt
caattacactatgacctggaaatggttcatcagagaagctgttgcaatcttaatgagctg
cggatgcagagaagacaatggcaacacagtctcaatttggatatacaaaacatcaccctg
gagctcatcgttaacatgtttagagatgtcagtgattaccttaatcacgaacacagagtt
tttaacaccgatgagtttctaaagaccagggagccagaagaccaaccattttataaaaag
gtcttggaaacacacattttccactccttcttgaaagaacgtttgaatggaaaaatagat
aaattcacccaaatggatcttaatactcagacagaagacaaaagactgagtagatcattg
gattactctcgcagacccaccataaaggaaataaagattttgcgaaatggttctttagac
agcggtttgagtaaacgtctgggctcaagtctccctgacctagacaacaagaaacacctg
aatgtcctcaaacagttgtctccaactaagatccttcctgaaaagtctatgattactcca
gtcaggccagtcaagaacttccagctcccagatttcccttctcccttgaacttcaccaac
atacttcattactttggagatcttatcctccagctgaacaaagccatatcagccagccca
gctgttgattccttcctgctagcaagatacttttacctgcgcgggctcatcaacatgctg
tgctctaagcgactggatgccctcagtgacttccagaacctctacaaaacagatattgag
atttttcctggcgagctggtgaagacactggcagactctctgcagatagaggagagagcc
caggcagagaagagacctgagctcagatggctcatctgtcaggtgaagaagaatgaaaac
agtgagcatgtagaatcagattgtcacgtgagaaagtttgagcttcccaagacccctatg
cagctggaggagtttgtgaagtgcactcagcaatctggtattgtgcgggacatggcaact
tcaaaaagattgtttgaagctctcactgttggtgggccgaagcatattaatccagagatg
ttcaaagtgttttataccttctggaaacaggcagaagcacaggacattgacctgcctgtt
gaagtcttggaacacctagacaacaatgagtgtgtgtacaagctgtccagctctgtgaag
accagttatggtgttggaaaaattgccatgactcagaagaggctatttctgttgaacaca
tgcagacatggatatgttgagattaccaaatttagggacattgaggaagtaaagatctct
gctgcttcattctcacttttgaggatcccatctctaaagatcaagaacagcctaagacaa
gaaatatttgaggctaatttaaaatcggagtgtgaactgtggaacctgatggtcaaggag
atgttggcaggaagaatgatggcagacaaccataaggacccccagcatgtgcagcaggca
ctgaccaatgtcctgcttatggatgcagtggtgggctgtgtacagtcacagaaggctgta
tgtgctgcctccaaactggcctattatgaaaagcagcgacaagaagtcccgataatcatc
cccagacccacagcagaggcgctgaaacacaagatcaatccatcccagaacatgacgaac
cctcagtctgtcgatgccttgctctacactccaggccagttaactttcccagatagagat
gtggatggaaaccccaagctctggtgtgctctcagctgtggaaaagtggttgtgtttgat
gctgtcagttggtccctgaagcaaaactgcattcatttaggagaatctcgactgaactgc
atgatgggattggaccaggagcaggtgtggattggttctcaggacgtcatttatataatc
aacactcgcagtatgctgtgtcataaactgctgactgagcaccatggagaggtcacagac
ttcgctctggagaaactgaacactgagaacagatcaagccaagcgcaggtgtattcctgc
agtgcagatggcactgtgatcgtttggctcgtcccctctctgaaggtgaagaggcagttt
catctgtcctgtgacagactgcagtctattcaagtttacaatgactccttatggtgtggt
gccagggattgcgtcatgaagctgagtcccagtggaactctgctttgtaagatttccctc
ccagatgatgtaaaaaccacatcctttagcagggttacactgcttatggagaaaagacag
atctggacaagtttcacagactcagcagaactttgtatatgggactccagtgaccccgtc
aaaccacctaatcgggtcacacttcccaactgcagtggggtcacctgtatgatcagagta
aaggatcaggtctggattggttgcagtggtgggtcaggcctcagcaaggttgtggggaag
atctttgtgttggactctgagagcctgaaggttgagaaggagcttgaggcccacgaagac
actgttcaagctctcttctcggcagaggaccgatacatactcagcggctctgcaaaacgt
gacggcagaattgccatctggagagtagattaa
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