Garra rufa (doctor fish): 141342974
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Entry
141342974 CDS
T11039
Symbol
gsdmeb
Name
(RefSeq) gasdermin Eb
KO
K22146
gasdermin-E
Organism
grf Garra rufa (doctor fish)
Pathway
grf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
141342974 (gsdmeb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141342974 (gsdmeb)
Transporters [BR:
grf02000
]
Other transporters
Pores ion channels [TC:
1
]
141342974 (gsdmeb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
141342974
NCBI-ProteinID:
XP_073703667
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All DBs
Position
9:complement(38028533..38043538)
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AA seq
470 aa
AA seq
DB search
MFAKATKNLLSEIDTDGSLIPVSRLNDSDGLAPLAVVIKRNRYWFWQWPKYLSSDFKLDD
ILVGDPMEPVVAETDFLTYSGKIVDNKSGSAAAELGMGSINVGGVGSSKLQTSFGNLKKQ
EVDIQKLLKDSKSRVLDLNHTLIEQTRETKREVLTLVKERIITTQACAITEEVQEGGTCA
GIFGFNKTIKVSVNEKTKHFIESDTNVSINIPPKTTLAYSVIELDVSNTGHFELCLLPNV
KGGFEVDGKVKLKEVNTLTGAPRQPTSKLHKDLEGLQGQFTVLSTLPSSTRSTLFQKVSQ
LLQNSIAINVLEDALEDLCGGTQPDQTKLDKTPALKATLEIVQKAAGKDCSGKQVKPSLL
TAMHLLISSLDEMTDSALSQLKSCCTYPILQALLHLVQNMTSNKKVPLKDTAVLTDKKVF
KTTTSLFASCNVMLLKEKDSLVTKISDPKDNLPLMLCIAIKCLASLAPPV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaagccactaagaacctgctctctgagatcgacactgatggttccctgatc
ccagtgtcccgtttgaatgactcggatggtctggctcctctggccgtggtcatcaagcgt
aaccgttactggttttggcaatggcctaaatacctgtcatcagacttcaaactagatgac
attcttgttggagatcctatggaaccagttgtggctgaaacagactttttgacctatagt
ggcaaaattgtggataacaaaagcggaagtgctgcagcggagcttgggatggggtccatt
aatgtagggggtgtcggctctagcaaacttcagacatcgtttggaaacctaaagaaacag
gaggtggatattcagaagctcttaaaggattccaaatctagagtcctggacctgaaccac
actctaatcgagcagacacgagagacgaagagggaggtgttgacgctagtgaaggagcga
atcatcaccactcaggcctgcgccatcactgaggaggttcaagaaggtggtacctgcgct
ggaatattcgggttcaataagacaataaaggtgtcagtcaacgaaaaaacaaagcatttt
atcgagtctgacactaatgtgtctatcaacatcccacccaaaaccactcttgcttacagc
gtgattgaactagacgtttctaacactggacactttgaactgtgcctgctgccgaatgtc
aaaggtggttttgaagttgacgggaaagtaaagctgaaggaagtaaatacactcactggt
gcaccaaggcaaccaaccagcaaactgcataaagatctggaaggactccaggggcagttt
acggttctctctacactcccatccagcacacgctccacattattccagaaggtctctcag
ctcctgcagaacagcatagccatcaacgtgctggaagacgcactagaggacctgtgtggt
gggacgcagcctgatcaaaccaaattagataagacacctgctctgaaggccacgctggag
attgtacaaaaggctgctggtaaagactgctctggaaaacaggtgaaacccagccttctg
actgccatgcacctactcatcagctctttagacgaaatgactgactcggccctgtctcaa
ctcaaatcctgctgcacttacccaatcctgcaagctctgcttcatctcgtgcaaaatatg
acctcaaataagaaggttcctttgaaagatactgctgtgttaactgacaagaaggttttc
aagacaaccacgtcactctttgcttcctgtaacgtgatgctgcttaaagagaaggattca
ctcgtgacaaaaatcagcgacccgaaggataaccttcccctcatgctgtgcattgcaatt
aaatgcttggcgtctctggcgccccctgtttga
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