Garra rufa (doctor fish): 141342982
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Entry
141342982 CDS
T11039
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141342982 (tcea3)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
141342982 (tcea3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
141342982
NCBI-ProteinID:
XP_073703675
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Position
9:17003681..17017439
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AA seq
709 aa
AA seq
DB search
MTREEDLLRIAKKLDKMVSRNNMDGALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCT
DEDVVNLAKILIKNWKKLLESAQNQKSERSNEVKNGNHPSKPSGSPNRTSPEREPSPRKS
TTEIKPDLDLNKKLDEKHRREKRDAELRIEKRESEQKKEKQPINNKKERERKDALNSVHI
PSPMTHSSPPPKCPPAGEVKRERKDAPVDFFPPASINSHPPLRRSSIDVKRERKDTRGSL
QSPSLQSHPPHKPKPFIDGKKERRDAPHPLFPLHHHIHSPLPPPPIPIPKRSSEVKKERK
DPPETLPPPAPAPILSSPHPPPHPPPPPKRPSLEEPKERAKKAPDPNAPLPPLPFHLHPP
QKREMKKERKETAEPSAPLPPVPLHLQPPTPTKRPSLDTKKDKEKERKDTSDPKRRTSEH
NEKDRKDTRDSKPLKRPSVKIKIERKDSTDSKKLHSRKLSLDGRRDRDSTDSKSSHHVLK
RQSSESKMERRDSTNSRSGSSPQAKKFSESKSKPETPKTPTTPTSPLSPSFSSGMGPLSP
RLQTGDSIRDKCIEMLAAALRTDDDHKDYGANCEGMAAEIEDHIYQEIRATDMKYKNRVR
SRISNLKDPKNPNLRKNVLAGAIELSRIATMSAEEMASDELKQLRNVLTQEAIREHQMAK
TGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaggaggacctgttgcggattgctaaaaaactagacaagatggtgtctaga
aataacatggatggagctctagatcttctgagagaattgaaagatttcaacatgacactg
aagcttcttcaggatacaagaattggcatgtctgtcaatggaataagaaaacattgcaca
gacgaggatgttgtcaacttagcaaagatccttatcaaaaactggaagaagcttttggag
tcagctcaaaaccaaaagtctgagaggtcgaatgaggtgaagaatggcaatcatccaagc
aagccttcagggtcacccaacaggacctctcctgagagagagcccagtccacgaaagtca
acaacagaaattaaaccagacttagacttgaacaagaaacttgatgaaaaacacagaaga
gagaaacgcgatgcagagctcaggatcgaaaaaagagaaagtgagcagaaaaaagaaaaa
cagcctataaacaataaaaaggagcgagagaggaaagatgcattgaacagtgttcatatt
ccttctccaatgacgcattcatctccgccccccaagtgtcctccggctggggaagtgaag
agggagaggaaagatgctcctgttgattttttccctcctgcttcgatcaattcccaccct
cctctaagacgctcatcaatagatgtaaagagagagagaaaagacactcggggttcttta
cagtctccctctcttcagtctcatccgcctcataaacctaaacccttcatagatggaaag
aaagaaaggagagatgcacctcatcctttatttcctcttcatcatcacattcattcccca
cttcctcctcctcctattcctatccctaagcgttcatcagaagtgaagaaagaaaggaaa
gatcctcctgaaactttacctcctcctgctcctgctcctatcctttcttctcctcatcct
cctcctcatcctcctcctccccccaaacgtccatcactagaagaacccaaagaaagggca
aaaaaagcacctgatccgaatgccccgctccctcctttaccttttcatctacatcctcct
cagaaacgcgagatgaagaaagagagaaaagaaacagctgaacccagtgctcctcttcct
cctgttcctcttcatcttcagcctcctacacctacaaagcgtccctcattagacacaaag
aaagacaaagagaaagaaagaaaagacacatcagatccgaagcgacggacctctgaacac
aatgagaaagatagaaaagacacaagagacagtaaaccactcaaaaggccatcagtgaag
atcaagattgagagaaaagactccacagattccaaaaagcttcattctagaaagctcagc
ctggatggacggagagacagggactctaccgactccaagtcaagccatcacgttttgaaa
cgacaatcaagtgaatcgaaaatggagaggagagattctactaactcaaggtctggcagc
tcacctcaggccaagaagtttagtgaaagcaagagtaaaccagagaccccaaagacgccc
acaacaccaacaagccccctctccccatcgtttagctccggtatgggtcctttatctcct
cgcctgcaaaccggggattccatcagggacaaatgcatcgaaatgctggctgctgcacta
cgtacagatgatgaccacaaagactatggggcaaactgcgagggcatggcagcagaaatc
gaggatcatatctaccaagagataagagccacagacatgaaatacaagaacagagttcgc
agccgcataagtaacctgaaggatcccaaaaatcccaatctgcgaaaaaatgtcttagct
ggagccatcgagttgagccgcattgccaccatgtctgctgaggagatggctagtgatgaa
ctgaaacagttgaggaacgtgttgactcaggaggccatccgagaacatcaaatggcaaag
actggaggaaccaccactgacctgctgcagtgtggcaagtgcaagaagaaaaactgcacc
tacaaccaggtgcaaacccgcagtgctgatgaaccaatgaccacctttgtgttgtgcaat
gaatgtggtaatcgctggaagttctgctaa
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