Garra rufa (doctor fish): 141343083
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Entry
141343083 CDS
T11039
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141343083 (irx2a)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
141343083 (irx2a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
141343083
NCBI-ProteinID:
XP_073703778
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Position
9:complement(43697537..43701440)
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AA seq
443 aa
AA seq
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MSYPQGYLYQPPGSLALYSCPLAAPRSEELARSSSGSAFSPYPGSAAFTASANGFSSPLS
YSTDPATGFPSYMGSPYDAHTTGMAGAISYHPYGSPGYPYQLNDPAYRKNATRDATATLK
AWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRNKSEDED
EDDGDGERKDERTDKNMDNSEASAEDEGISLHVDALTDHSCSVESDGEKVTCRTGDLVCD
SVADTKDKCDASDLDTGREDRQRGLSPKPVTSSPLTGVEAPLLSHHHREDSRNGTNKTCL
DGQNQTVKPKLWSLAEIATSDPKQQREQQQNCPPGVGLLTSTAPSASPAGAVYPATSILG
RPLYYTSPFYGNYTNYGNFSPLQGQGILRYNSAGEGLLHKQSGEPLLKTNPNQTEQHFRA
SNAESKKDPSEVFTVRSQSYLSS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggcgctctactcctgt
ccgctggccgccccgaggagcgaggagctggcccggtcctcgtccggttcggcgttcagc
ccgtaccccggatcggcggcgttcacagcctcggccaacggattctccagccctctgtcc
tattcaacagatccggccacgggattcccgtcctacatgggctctccgtatgacgcgcac
accacgggaatggcaggagccatcagttatcacccgtacgggagtcccggttacccgtac
cagctcaacgatcccgcttaccggaaaaatgcaacgcgggacgcgacagccacgttaaaa
gcgtggctgcaggagcacaggaaaaacccttatcccacaaaaggagaaaagatcatgctg
gctatcatcacgaaaatgaccctcacgcaagtgtccacttggttcgcgaatgccagacgg
agactcaagaaagagaacaaaatgacatgggcaccgcggaataaaagtgaggacgaggat
gaggacgacggcgatggggagagaaaagacgaacgcacggataaaaacatggacaacagt
gaagcgtctgcggaggacgaaggcatcagtttgcacgtcgatgccctgacagatcactcg
tgctcggtggaatcggacggcgagaaggtcacgtgtagaaccggggacctggtttgcgat
tctgttgccgataccaaggacaaatgcgacgcgagtgatctggacacgggccgcgaggac
aggcaaagaggcctgtcacccaagccggtgacctcctcccctctgaccggggtggaggcc
cctctcttgagccatcatcaccgagaggacagccgaaacggcaccaacaaaacatgcctg
gacggtcaaaaccaaacggtcaaacctaaactctggtcattagccgagatcgccacttcg
gacccaaagcagcagcgagagcagcagcagaactgtcccccgggcgttggccttttgacc
tctactgcgcccagcgcgtccccggcgggcgcagtgtaccccgccacctccatattagga
agaccgctttattacacctcgccgttttatggtaattacacaaactatggcaacttcagc
ccgctgcagggccaagggatactgcgctataattcagctggtgagggactcctacacaaa
cagagcggcgagcctctgctaaagactaatccaaaccagactgaacaacatttcagggcc
tccaatgcagaatccaaaaaagaccccagcgaggttttcacagtaagatcccagtcttac
ctgtcgagttaa
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