Garra rufa (doctor fish): 141343145
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Entry
141343145 CDS
T11039
Name
(RefSeq) zinc finger protein ZFPM2-like
KO
K17442
zinc finger protein ZFPM2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141343145
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
141343145
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_4
FOG1-like_PR
zf-C2H2_8
zf-C2H2_fungi_2
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
141343145
NCBI-ProteinID:
XP_073703847
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All DBs
Position
9:10512891..10611438
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AA seq
1204 aa
AA seq
DB search
MASQHLNACGKHGDGGRLAHYAHRAVCRRLASRARVVSVTAGTSQLGREVSRRGLERSAD
DWHVRTRQRRWREDKADSTRAPRDKSRSVAGRPQKALNIAAKTRRKSALEILLSAPLTRG
LGPLPGKTEIEPTLPATKPVTSQRGFIRERKTLFQEELASQRFDTLHLIAISSENSLPIA
DARSEKKEKRRRSKDGTKEEKTKPHVPLVLNAGPRWLLDVTWQGTDDNKNNCVVYSKGGQ
LWCTTTKNMMEGEELVAFAVDFDSRLQAVNHMSLGEGMYPARLLDTIQLLPQQAAMASIL
PTAIVNKDIFPCKACGIWYRSERNLQAHLMYYCSGRQRDPDNVSEETDTNSHQTPSICPF
PQCNKSFSNPRALEMHLSTHSGVKMEESLPPGTSLKCTICNFTADSLLTFQHHILSHLSQ
AAFRCNHCHISFQNHRELLQHQDLHGHSGKIHRESDSENSPRGEESLQAARAELSGRKDV
VMQSPKSTPNKANSPDGELERPEKKPTLGLQKGESHPGSKASFSYTRIKSEPSSPRLASS
PVQHNMGPTFPMGPFLSQFAFSQDISVVPQASEILAKMSELVHRRLRHGGNSYPPVIYSP
LMPKGATCFECNITFNNLDNYLVHKKHYCNSRWQHMAKSPDFSSVPDKVSDAISPNSGHT
SVGMLPGCLPSETDSHLVTTACLNSSVLEIMNAGGKVPEKDLSGQVKKVTTPTGVEERLG
GKQPEVKSPSTALVEDVNDPNKTTCEACNITFSRHETYMVHKQYYCATRHDPPMKRMSTK
VPAMQRTMRTRKRRKMYEMCLPDQDQRQPMGPQPGFLGMPTLGNPCTSQETVESLADRFH
PRCDIFPSLVPKHLDASLTVSKPILAPKGNAIADPQELDAPIDLSKKCSPLSDKSCNSPK
RLLDYHECTVCKISFNKVENYLAHKQNFCPVTAAQHGEIGNLEQPMFPGVKSEGNNSEDI
FDKSSVKCEKNGGNKLMVQNGGMFPPHLGPTPDLKAFGDTSLMTSKDENKNMFLPHCLYP
GAIKKVKGTEQISPYFGIKSSDYMAGSLIMQGEVAEQEQSSNGAGETGTEPPAANGCPHP
GKEALPLLPKNRSMVIVNGGHKEDRQTPATPQQENQPHNTSSPEEQTSPTWGAENPPDPN
ENVSPTSKSPVEESAPAGKGINGSAAPAGSGKYCRLCDIQFNNLSNFITHKKFYCSSHAA
EHVK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcaacatctaaacgcttgtggcaaacatggcgacggtggcaggctggctcat
tacgcacacagagccgtatgtcgtcgtcttgcctctcgggctcgtgtcgtatcggtaaca
gctgggacgagccagctgggacgtgaggtttcgagacgtggcttggaacgctcggcggac
gactggcacgttcgtactcgccagcgacgctggcgggaagataaagcagatagcactcga
gctccgagggataaatctcgctcagtcgcaggtcggccccaaaaagctctcaacatcgcc
gcgaaaacccgccggaagtctgctcttgagatcctcctcagcgcgccactaacaagaggc
ctcggcccccttcctggaaaaacagaaatagagcccacgctgccagccactaagcctgta
acatctcagcgaggttttatcagagagcgaaagacgctctttcaagaggagttagcatcc
cagcggtttgacacgctccatctgatcgccatcagctctgagaacagcctcccaatagca
gatgctcgctcggaaaaaaaagaaaaaagaagaagaagcaaagacggcaccaaggaggag
aagacgaagccacacgtcccgctggtgctgaacgcaggccccaggtggctgctggatgtg
acttggcagggaacagacgacaacaagaacaactgtgtggtttacagcaaaggtggtcag
ttgtggtgcaccaccaccaagaacatgatggaaggcgaagagctggtggcattcgcagtg
gactttgactcccgattgcaggcggtcaatcacatgtctctcggtgagggcatgtaccca
gcacgccttctggacaccatccagctcctgccccagcaagctgccatggcctccatatta
cctacagctatagtcaacaaggacatcttcccctgtaaagcgtgtgggatatggtacagg
agtgagaggaaccttcaggcccacctgatgtattactgcagtgggcggcaaagggaccct
gataacgtctctgaagagactgacaccaattcccaccaaactcccagtatttgtcctttc
ccacaatgcaacaagagcttcagcaaccctcgtgctctagagatgcacctgagcacacac
agtggtgtcaaaatggaggagtctcttccccctggcaccagcttgaaatgcacaatctgt
aacttcacagcagattcactccttacattccagcaccacatcctctcacacctgtcacag
gcagccttcagatgcaatcactgccacatcagcttccagaaccacagggaactgctgcag
catcaagacttacacgggcactctgggaagattcacagagagagcgacagcgagaactcc
ccaagaggagaggaaagcctgcaggcggcacgagccgaactgtcaggcaggaaggacgtg
gttatgcaaagtcccaaaagcacgcctaacaaggccaacagtcctgatggagaacttgaa
agaccggagaaaaaacctactctcggactgcagaagggagaaagtcacccaggaagcaag
gctagtttctcttacaccagaatcaagtccgaaccctctagtccacggctagcttcctcg
cctgtccagcacaacatgggaccaaccttccccatgggtccattcttgtcacagtttgca
ttctcccaggacatttcggtggtaccacaagcatctgagattctggccaaaatgtcagag
ctggtgcatcgcaggctacgccatggagggaacagctaccctcctgtcatctacagtcct
ctcatgcctaaaggagcgacctgctttgaatgcaacatcaccttcaataatctagataac
tacttggttcacaagaagcactactgcaacagtcgctggcagcacatggcgaagtcccca
gatttctcaagtgttccggacaaggtgtccgatgccataagtccaaacagtggccacact
tcagtcggtatgctccccggatgccttccgtcagagactgacagtcatctcgtgacgacg
gcttgcttgaattcgtctgttttggaaattatgaacgctggtgggaaagtgcctgaaaaa
gacctttctgggcaagtaaagaaggttactacaccaacaggagttgaggaaaggctcggc
gggaaacagccagaggtgaagagtcccagcacggctttggtggaggatgtcaacgaccca
aataagaccacctgtgaagcatgcaacatcaccttcagccggcatgaaacatacatggtt
cacaagcagtactattgcgccactcgtcacgacccgcccatgaaacgcatgtccacaaag
gtgcccgccatgcagcggaccatgagaacgcgcaagcggaggaagatgtacgagatgtgt
ttaccggaccaagaccagcggcaacccatggggccacagccgggattcttgggtatgccc
actctaggaaatccttgcacatcccaggaaacggtggaaagcctggccgaccgctttcat
ccacgatgtgacatctttccgagcctcgtcccgaaacacttagatgcttctcttactgtc
tccaagcctatccttgcccccaaaggtaatgctattgcagacccgcaggaactagatgct
ccgatagatctgagcaaaaagtgctcacctctttctgacaagtcgtgcaactcgcccaaa
agactcttggactatcacgaatgtaccgtgtgcaagatcagttttaacaaagtggagaac
tacctagcccataaacagaacttttgccccgtcacagctgctcagcatggcgagatcggc
aatttggagcagccgatgttcccgggagtgaagagcgaaggcaataattcggaagacatc
tttgacaagagttctgtgaaatgcgagaaaaacggtggcaacaagttgatggttcagaac
ggaggcatgttcccaccacacctcgggccgacgccggatctgaaagctttcggcgatacg
tcgctcatgacttcgaaagatgagaacaagaatatgttcttgcctcactgtctctatcct
ggagcaataaagaaggtgaaaggtactgagcaaatatcgccgtattttgggataaaaagc
agcgactatatggcagggagtctcattatgcagggtgaggtggcggaacaggagcaaagc
agtaacggtgcgggtgagacgggcacagaaccgcctgcagccaacggctgcccccatcct
ggaaaggaggcgctgcccctgctgcccaagaacaggagcatggtgattgtcaacgggggt
cataaagaggatcgccaaacaccagcaactccccagcaagagaatcagcctcacaacacc
tcatcaccagaggaacaaacctcacccacgtggggagccgagaaccctcccgacccaaac
gagaatgtatcgcccacttcgaaatcacccgtggaggaatccgcgccagccggaaaaggc
ataaatgggtcggcggcgccagcgggcagtgggaagtattgccgcctctgtgacatccag
ttcaataacttgtcaaactttatcactcacaagaagttttactgctcgtcacatgccgcc
gagcacgtgaaatga
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