Garra rufa (doctor fish): 141343520
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Entry
141343520 CDS
T11039
Symbol
tpra
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141343520 (tpra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141343520 (tpra)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141343520 (tpra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ERM_helical
DUF7310
Surfac_D-trimer
Motif
Other DBs
NCBI-GeneID:
141343520
NCBI-ProteinID:
XP_073704186
LinkDB
All DBs
Position
10:30638741..30679905
Genome browser
AA seq
2353 aa
AA seq
DB search
MAALLQQALERTEINKLPKAIQNKLEKVLSEQQTEIDSVKSQYERYKADCEQQYFNLEKK
LAESQEQFLSQSKEYHSIKEENGRLAEELKKLKDLEEEQGTTQESKPQRAKYEIEAENRE
LSRMLEKRSQEVENLSEDLKRLNDKLVETNTIKMELQLKLDELQSSEVSIEYREKRMEQE
KELLQNENTWLNAELKSKTDELYTVSRDKGKENLELKCSLESKKQEVTRLQDQVNTLKKN
NDSMQKSTEDLMNKLKEAKEQRASMEEKYRNELNANLKLCNLYKGAAADSEAKNAELNRA
VEELNKLLKEAMEANKGAEKRLSELQSVREKAETDLHEKVRHLEKELENSNTRLADFKRR
GVPALTEEELTTLSPTAAAVAKIVKPGMKLMELYNAFVEAQDQLHLEKLESKRVNKVLDE
IVLEVETKAPILKRQREEYENMQKSMTSLCAKLEQAMKEVHRLQKETDEANKRALGLERD
KQRSERQLADTSEQVRVLLVEVEEARGNQVVREDVNSAVSSSSEVQGSRQVAFRSVQELQ
QQNQTLLAQIRELEEQRERDQNQAKTARQIELEQSLEKVQKELEQIKEQLNHHKQLADSA
TRQRDMYCILLQTAGVELPPQGSETVSQSTTPNRPGPMATRSTPLRAAAAESLQATQAKA
ALKQLNDAFTTYKKEKAENDKLLNEQIERLRGQVSDLLSQKAKLSTQLEFAFKRYEMLQE
NVNGFRREVEALRERNQKMTATHQRHEQIIHTMTQDLREANEKLVMAEFRVENIRKERDI
LKQVENRLNQEKGSILTEQRGQNLLLTNLKSIQLTMERSETDTKQRYSNQIQCLEKEIVQ
LKKKVQQEVEQRHALERNQDVQLLQAKKQLETQTALHQKTKELLRTAEQQVTTMRQQLNN
NENQSTVPKQPVRALPRVSAPGVPQQEVDELRARLQQAEEQNSDLKERLKNTTTNVEQYR
SMVLSLEESVNKEKQLAEQARTSTDSQLKTARELNQQLEARLVEAEKEKLELQEEKMKAV
DNIEERVKELKRSMMDMQTELQDALQKAVEAVAQEQRATQDSKLQGKLAAEAQNKYEREL
MLHAADVEALQAAKKQGQQSAQTMRQLEEKAQKAASELRQGRMDWEQQEKRLKEELSKEQ
KRAGELQKQNTMLHEQMENLSSKITASTQQQTARESSLNISLNEEGKSHEQILDILRFVR
REKEIVETRLEVAEVETLRYKQRMEYLEGELKELQDSLNAEREKLQATTKTLVQQEDMMK
RMESMSALTETNKMLKNEKNRLEHELQQAQAKMRKLEADIKPLQDGNAELSEKSGMLQAE
KRLLEEDVKRLKIRTQQLLSQQKDNDQEETKKLHAEREAHIKRIQQLIDETGKLKNEVAR
SQASITTAQSQVQNLQESLGKVTTEKDNLKKELEAKTVDIQEKLKTITQVKKIGRRYKTQ
YEELKEQHDKMVAEAASKPAQEQEDRQASVQEIQNLKSSLSQTQNRTSELETQLDSIQKT
VQEREAEVKSLQEQLGQVQPELTRLRAELQEKSNLEEQLRQQIADKEEKTKKAFMGAKQK
INQINSAKEQLAKENEELKQQREELEVRMNALKSQYEGRLSRQERELRELREQQERHGDQ
KDEAQEPGQSKVQEAQRSSDTRQITLKPTPAADRGSASTSEPPTANIKPTQVAATPSKPS
PIAGSKSTPRASIRPMITPAPVTTPTPTATVMPTTQVETQEALQSTEGPMEHVTVFGSTS
GSVRSTSPNIQTTQPILSLQQSQATAFVQPTQQQTSQEPATTIMEAAHSSQMERPSTSTA
VFGTVSATAGSSVSKRVREEEQESSTEVTDTTQDDSTLPPITKKLRIIRRIGLEDTSGTE
ESNDAMSEAPGEAQQPPDASEEVFPVLGEGDEESLSQSVPMDQVSESQPSESQISGQDSS
EDFKHDVIIIETDSNTEEEEEEQEEPGQYEDDDAEDEDDEDGDGGMAEAAEESNEGSGSA
DANEAYEEDEAEGDGAADPGIDNEESQEASDSIQKQADSQSSEASVSTLECFPAEPVREH
QPVPSTTTITTTTSSSLGPRLPQSPRRPHHTPPPRLNIHPVPELGPPIMQRQSGQSRRPS
MSRAPQLTPGIGSMQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPP
EDMMPQASSSHSDLSHLATHGGLGMYESPLFLPTHDEESGGRSVPTTPLQVAAPVTVFTE
SHPSDVSETASQSVPMVSTSTASLTAPGEAVPGDDGDDVFVGEAESEGMSSEACLEGQSE
VESAQPTDDASLPSTSQEPTSSSADTSTSTGQAKPASRLLPQHQLPRRNQIIRRGGVFPR
GSRGRGLNRGTPF
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacttcttcagcaagcgctggagagaactgagattaacaaactgccgaaagca
atacagaacaagctcgagaaagttctgtcggagcagcagacggaaatagactcagtgaaa
tcacagtacgagcgatataaagcagactgcgagcaacagtactttaatcttgagaagaag
ctagctgagagtcaggagcagttcttgtcccaaagtaaagagtatcacagtattaaggag
gagaacggccgccttgccgaggaacttaagaagctaaaagatttagaggaagagcagggg
acaacgcaggagagtaagccgcaaagagccaaatatgaaatcgaggcagaaaacagagaa
ctctcgcggatgcttgagaagagatctcaagaagttgaaaatctcagcgaggatcttaaa
cgtctcaacgacaaactcgtggagaccaacacaatcaagatggagctccagcttaaatta
gatgaacttcagtcatctgaggtttccattgagtatcgtgagaagcgtatggaacaagag
aaggagctccttcagaatgagaacacatggctgaatgcagagctgaagagtaagacagat
gagctgtacacagtatccagagacaagggcaaagagaacctggagctcaagtgctcttta
gagagcaagaagcaagaggtgaccagacttcaggaccaagtgaacacgctcaagaaaaac
aatgacagcatgcagaagagtactgaggatctcatgaacaagctcaaagaggctaaagaa
caacgggcctccatggaggaaaagtatcgcaacgagctaaatgctaacctcaagctctgt
aatttgtacaagggtgcagcagcagactctgaggccaagaacgcagaactaaacagagct
gtagaagaactcaacaaactgttgaaggaggctatggaagccaataaaggcgcagaaaag
aggctgtcagagctgcagagtgtgagagagaaagcagagactgatctacatgagaaagtc
aggcatctggagaaagagctggagaactccaacacacggcttgcagactttaagagaaga
ggcgttccagctcttactgaagaggagctgacaaccctctccccaactgcggctgcagtg
gccaagattgtaaagccgggcatgaagctaatggagctgtataatgcgtttgtggaggca
caagatcagctgcacctggagaagctggagagcaaacgtgtgaacaaggttctggatgag
attgttctagaggtggagaccaaagctcccatcctgaaacgccagagggaagaatatgaa
aacatgcaaaagtccatgaccagcctctgtgccaaactggagcaagctatgaaggaggtt
catcggctccagaaggagacagatgaagccaataagagagccttaggactagagagagat
aagcagagatctgagagacagctagcagacacgtctgaacaggtacgtgtgctgctggtg
gaggtggaggaagcacgtggtaatcaggtggtgcgtgaggacgtgaactctgctgtaagc
agcagctctgaggtccagggctcacggcaggtggctttccgcagcgtccaagagcttcag
cagcagaaccagaccctgctggctcagatcagagagctggaagagcagagagagagagac
cagaaccaggctaagaccgccaggcaaatagagttggaacagagtctggagaaggttcag
aaggagctggagcagatcaaggaacagctaaaccaccataaacagctagctgactctgcc
acccgacaacgagacatgtactgtatcctgttgcagacagccggagttgaacttccacca
cagggttcagagactgtgtctcaatccaccactcctaacaggccaggacccatggccacc
agatctacacctctaagggccgcagctgcagaatctctccaggcaactcaggctaaagca
gcacttaaacagcttaatgatgcctttacaacatataaaaaggagaaggcagaaaacgac
aagcttctgaatgaacagattgaaaggcttcgtggtcaagtgtctgaccttctctcgcaa
aaagctaaactttccactcagctggaattcgccttcaaacggtatgagatgcttcaggaa
aatgtgaatggctttcgacgggaggttgaagccctccgtgagagaaatcaaaagatgact
gccactcatcagcgacatgagcaaatcattcacacaatgactcaagatctaagggaggcc
aatgagaaactagtcatggctgagttccgcgttgagaacatccgtaaggaaagagacatt
ctgaaacaggtggagaacagactgaaccaggagaaagggtccatcctgactgaacagcgg
ggccagaacctcctacttaccaacctcaaatccattcagcttaccatggagcgctctgag
acggacaccaagcagcgctacagtaaccagattcaatgtctggagaaagagattgtccag
cttaagaagaaggtgcaacaggaagtggagcagaggcatgctctggaacgcaaccaagat
gttcagctgctgcaagcaaagaagcagttggagacacagacagcactacatcagaagact
aaagagctgctaagaactgctgaacagcaggtcaccactatgagacagcaactgaacaat
aatgagaaccagagcacagtgcctaagcaacctgtcagggcattacccagagtttcagct
cctggtgttcctcaacaagaggtggatgagctccgtgcacgtctacagcaggcagaagaa
cagaactctgacctgaaggagcgtttgaagaacaccaccaccaatgtagagcagtacaga
tccatggtgctcagcttggaggagtctgtaaacaaagagaagcagttggctgagcaagcg
cggacctccactgacagccagctgaagacagcacgagagttgaaccagcagctggaagcc
cggctggtggaagcagagaaggaaaaactggagctccaggaggagaagatgaaagctgtg
gacaacattgaagaacgggtgaaggaactgaaaaggagcatgatggacatgcagacagag
cttcaggatgccctccagaaagctgtggaagcagtggcccaggagcagagagccactcag
gacagcaaactacagggaaagctggctgcggaggctcagaataaatacgagcgagagctc
atgctgcatgctgcagatgtggaagccctccaggctgccaaaaaacagggacagcagtca
gcacagaccatgaggcagcttgaggagaaggctcagaaagctgcatctgagctgcgtcag
ggccgtatggactgggaacagcaagaaaagagacttaaggaagaactttctaaagagcag
aagagagctggagagctccagaagcaaaacaccatgctccatgagcagatggagaacctg
agcagcaagataaccgcctccacccagcagcagaccgctagagagagcagtctgaatatc
tctctgaatgaagagggcaaatctcatgagcagatcctggacattctcaggttcgtacgg
cgggagaaggagatagtggagacccggctggaagtggcggaggtggagactctacgttat
aaacagcgcatggagtacctggagggagagttgaaggaactgcaggacagcctgaatgca
gagagagaaaagctacaggctacaacgaagaccttggtacagcaggaagacatgatgaag
agaatggagagtatgagtgctctgactgagaccaacaagatgctaaagaatgagaagaac
agactggagcatgaactacaacaggctcaagcaaagatgcgtaaactggaagcagacatc
aagcctctgcaggacggcaatgctgagcttagtgagaagagtggcatgttacaggctgag
aagagacttctggaggaggacgtcaagcgcttgaaaatacgaacacagcaactgcttagt
cagcagaaggataacgatcaggaggaaactaagaagcttcatgccgagagggaggcccat
atcaaacgcatccagcagctcatagatgagacggggaaactcaagaatgaagtggccagg
agccaagcttcaatcaccacagctcagagccaggtgcagaacctgcaggaaagccttggg
aaggtcacaactgaaaaggacaatctgaagaaggagctggaagcaaagactgtggacatc
caggagaaactcaaaaccataacacaagtcaagaagatcggccgtcgctacaaaacccag
tatgaagagctcaaagaacagcatgataagatggtggcagaggctgcttctaagccagca
caggagcaggaagaccgtcaggcctcagtgcaagagattcaaaacctaaagagctcactg
agccagacacaaaacagaacctcagaattggaaactcagctggacagcatacagaagacg
gtgcaggagcgtgaagccgaggtgaagagcctgcaggagcagctgggacaggtgcagccg
gagctcacccgactgagagcagagctacaggagaagagtaacctggaggagcagctccga
cagcagatcgctgataaagaggagaagactaagaaagccttcatgggtgccaagcagaag
atcaaccagatcaacagtgcaaaggagcagctggcgaaagagaatgaagagctgaagcag
cagagagaggagctggaggtgaggatgaatgcgctcaagtcccagtatgaaggccggttg
agtcgacaggagagagagctgagggaactccgtgagcaacaggagagacatggagatcag
aaagatgaagctcaggagcctggccagagcaaggttcaagaggcccagaggtcatcagat
actcgccagatcactcttaaacccacacctgctgctgacagaggaagtgccagtacatcc
gagccacccaccgctaacatcaagcccacacaagttgctgccacccccagcaagccttca
ccaatcgcagggagcaagtccactcctagggcaagcatccgcccaatgataacacccgct
cctgtaaccacacctactcccacagccacagtcatgcccaccacacaggtggaaacacag
gaagccctccagtccacagagggtccaatggagcatgtgactgtctttggcagcaccagc
ggctcagtgcgctccaccagccctaacatacagactacacaaccaatcctcagcctgcag
cagagccaagccacagcctttgtccagcccactcagcagcaaaccagtcaggagccagca
acaaccattatggaggcagcacatagctcacagatggagaggccgtccacttccactgca
gtctttggcacagtgtcagcaacagcaggctcatctgtgtctaagcgagtgcgagaggaa
gagcaggagagctccacggaggtgaccgacaccacacaggatgactccacactcccacct
atcactaagaagctccgcatcattagaagaattggcctggaggacacttccggcactgag
gagagtaatgatgctatgagtgaagctccaggagaagcccaacagcctcctgatgccagt
gaggaagtgtttccggtgttaggagagggagacgaagagtctttgtctcagtctgtccct
atggatcaggtgagcgagtcccaaccctccgagtctcagatcagtggacaggactcatcc
gaggactttaaacatgacgtcatcatcatagagacagatagcaacactgaggaggaagag
gaggagcaggaagagcctggacagtatgaagatgatgatgcagaagatgaagatgatgaa
gatggtgatggagggatggcagaagcagcagaggagagtaatgaaggcagtgggagtgca
gatgccaatgaggcctatgaagaggatgaggcagagggcgatggggcagctgatccaggc
attgacaatgaagagagtcaagaagcatctgattcaatccagaagcaagcagactctcag
agcagtgaagctagtgtcagcaccctggagtgcttccctgctgagcctgtgagagagcac
cagccagttcccagcaccaccaccatcaccaccaccacctcctcttctctgggcccacgt
cttccccaatctccccgaagaccacatcacaccccacctccacgcctcaacatccaccct
gtccctgagctcggtccccccatcatgcagaggcagtcaggacagagcagacggccctca
atgagtcgtgcaccccagctcactcctggaattggaagcatgcaacacttttttgatgat
gatgacagaatggttcctagcactcccacccttgtggtgccacaccgcacagatggcttt
gcggaggccattcattcccctcaggtggccggagtacctcgcttccgtttcggccctcct
gaggatatgatgccccaggccagctcctctcattctgacttgagccatctggccacacat
ggagggttgggcatgtatgaaagtcctctcttcctgcccactcatgatgaagagtctgga
ggcaggagtgttcccaccacccctctacaagtggctgcaccagtgactgtattcacagag
agccacccctctgatgtgtctgagacagcctctcagtcagttccaatggtcagcacgtcc
accgccagtctgactgcaccaggagaagctgtcccaggagatgatggagatgacgttttt
gtgggggaagcggagagtgaagggatgagtagtgaggcatgtctagagggccagtcggag
gtggaatccgcacagccgaccgatgatgccagcctgccctccaccagtcaagagccaaca
tccagctccgcagataccagcaccagtactggtcaggccaagcctgcaagccggctcctt
cctcagcaccagctgccccggaggaaccagatcatcaggagaggtggtgtttttcctcgt
ggaagtcggggtcgaggactcaacagaggcactcccttctaa
DBGET
integrated database retrieval system
