Garra rufa (doctor fish): 141343585
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Entry
141343585 CDS
T11039
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
grf Garra rufa (doctor fish)
Pathway
grf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141343585 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141343585 (stag1a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
141343585 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
141343585
NCBI-ProteinID:
XP_073704253
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Position
10:complement(27121101..27180947)
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AA seq
1257 aa
AA seq
DB search
MITSELPVLQDSGESGQDTVSLSMSMSELDDPGDGKTKKKRGRPGRPPAPNKKPRKSPLE
KGPMGVQRGRKANGMAQQNGEGDPVTLFEVVKQGKSAMQSVVDDWIESYKQDRDLALLDL
INFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTISGPLWKKFRYNFCE
FICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNL
SINQDNTQRQYEAERNKMVGKRANEKLELLLQRRKELQENQDEIENMMNSIFKGIFVHRY
RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLYTN
RELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVYHLV
YSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESELHEH
AAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESSLIELTVCTIRQAAEAH
PPVGRGTGKRVLTAKERKMQIDDKNKLTEHFIMALPMLLSKYQADAEKVANLLQIPQYFD
LDVYSAGRMEKHLEALLKQIKFVVEKHTDTEVLEACSKTYSILCSEEYTIMNRVDIGRSQ
LIDELADRFNHSVEELLQAGEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGNCYRLL
RTGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGTPSKDDLLALRRVVKSFLAVCQQCL
TNVNTPVKEQAFMLLCDLLMIFSHQLTTGSREGLQPLVFNPDSTLQNELLNFILDHVFID
QDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIIDMPAAADIFKHYMKYYNDY
GDIIKETLSKTRQTDKILCAKTLILSLQQLFNELIQDQGPNLDRTSSHVSGIKELARRFA
LTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGPEYPPPNLAFLEVLCEFSSKLLRQDKK
TVHSYLEKFMTEQMMERREDIWLPLISYRNSLLTGGDEDRMSITSGSSSSKAGSIRSKKG
RPPLHKKRIEEESVESSWMMRNDTLQTPGALQTPQLTSTVLRENPRQAAEHLPEQNSEPG
SESDYVHNPQMQMSWLGQQKMEEVNRKERTAMNYMKARSGVRQTVRGLMEDDAEPIFEDV
MMSSRGQLEDMSEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMPMF
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcagagctgccagtgctacaggactccggtgagtcgggtcaggacacagtg
agtctcagtatgagtatgagtgagctggacgacccgggagatggaaaaaccaagaagaaa
agaggacggcccggcagaccacctgcacctaacaagaagcctcggaagtcacctttagaa
aagggcccgatgggagtccagcgggggcgaaaggccaatggaatggcccagcaaaacgga
gagggtgatcctgtcactctgtttgaagtggtcaaacaaggaaagagcgctatgcagtcg
gtcgttgatgattggattgagtcttacaaacaagacagagatttagcacttctggacctc
atcaacttcttcatccagtgctctggctgtaaaggcactgtaagaatcgaaatgtttcgc
aacatgcagaatgctgaaattattcgcaaaatgacggaggagtttgacgaggacagtggc
gattaccccttgaccatttctggcccgttgtggaagaagtttcgctacaacttctgtgag
ttcatctgcgttctgatccgccagtgccagtacagcatcatctatgatgagtacatgatg
gacacggtcatctctctgctgacgggtctgtcggactcacaggttcgagccttcagacac
accagcactctggcagccatgaagctcatgacagcactggtgaacgtagctctgaatctg
agcattaaccaggacaacacacagaggcagtatgaagccgaacgcaacaaaatggtggga
aagagagccaatgagaagcttgagcttctacttcaaagaaggaaagagcttcaagaaaac
caagatgagattgaaaacatgatgaactcgatcttcaagggaatctttgtgcatcgttat
agggatgcgattgctgaaatcagagcgatttgtatagaggagatcggtgtttggatgaaa
atgtacagcgatgccttcctaaacgacagctacctgaagtacgtgggctggaccttacac
gaccggcaaggcgaagtgcgcttgaagtgtttgaaagccttacaaaacctttacacaaac
cgtgaactgtttccgaaacttgagctcttcacaaaccgtttcaaggatcgtatagtttct
atgacgctggataaagagtatgatgtggctgtggaggccataagactggtcacacttatc
cttcagggtagtgaggatgctctgtctaatgaggactgtgagaacgtctatcatctggtg
tactctgctcacaggcctgtggcagtggctgctggagagtttctacatcgaaagttgttc
agcagacatgatcctcaggcggaggaagctctggccaaacgcagaggcaggagcagccca
aatggaaacctcattcgcatgctggttctcttctttttggagagcgagctgcatgaacat
gctgcctatctagtggacagtttgtgggagagctctcaggagctgctgaaggactgggaa
tgcatgactgaactgctactggaggagccagtacagggtgaagaggtgttgtcagacagg
caggagagttctctgattgagctcactgtctgtacgattcgtcaggctgctgaggcccat
ccacctgtagggagagggactgggaaaagggtcttgacagcgaaggaaaggaagatgcag
attgatgacaaaaacaaattaacagagcacttcatcatggctcttccaatgttactttca
aaataccaggcggatgcagaaaaagtagccaacctcctacagatcccacagtactttgac
ctggatgtgtacagtgctgggagaatggagaagcacttggaggccttgctcaagcagatt
aagtttgtggtggagaagcacacagacacggaagtgctagaggcctgcagtaagacctac
agcatcctgtgcagtgaggagtacaccatcatgaaccgtgtggacattggccgaagtcag
ctcattgatgagctggccgaccgcttcaaccactcggtggaggagctgctgcaggcgggg
gaagaggcggatgacgatgacatctacaatgttctttccactcttaaaagactcacagcc
tttcacaacgctcatgacttgaccagatgggatttgtttgggaactgctacaggttgcta
aggacgggaatagagcagggctctatgccagagcagatagcagtacaggctcttcagtgt
tctcattactccatactgtggcagcttgtgaagatcacagagggaactccatccaaggat
gatctcctagcattacggagggttgtcaagtcttttctagctgtgtgtcagcagtgttta
acaaatgtcaacacgccggttaaagagcaggcgttcatgctgctgtgcgacctgctgatg
atcttcagtcaccagctcaccacagggtccagagagggtctgcaacctctggtcttcaac
ccagacagcaccctacagaacgagctgctcaacttcatcctagaccatgtgtttatagac
caggatgatgagaatcagagcatggagggtgatgaggaggatgaagctaacaagattgag
gccttacacaaaaggagaaaccttctagctgccttcagcaagctcatcatttatgatata
atagacatgcctgctgctgcagacatcttcaaacactacatgaagtactacaatgattat
ggagacataatcaaggagactctaagcaagaccagacagacggacaagatactgtgtgcc
aagacgctcatcctgagcttacagcagctctttaatgagctgatccaggatcaggggccg
aacttggacaggacctcatctcatgtgagcggcattaaggagttggcccgtcgctttgcc
ctcacctttggcttggaccagatcaagaccagagaggctgtagccacactgcacaaagat
gggattgagttcgccttcaagtatcagaatcctaaaggaccagagtatccccctccaaat
ctggccttcctggaggttctctgtgaattttcctcaaagcttcttcgccaagacaagaaa
acagtgcactcgtatctggagaagttcatgacggagcagatgatggagaggcgggaggac
atctggctgcctctcatctcctacaggaactctctcctgacgggtggagatgaagatcgc
atgtccatcaccagcggcagcagcagcagcaaagctggatccatacggagcaagaagggc
cgtccaccactgcacaagaaacgcatcgaggaggagagcgtggagagctcttggatgatg
aggaacgacaccctacagacccccggagccctgcagacaccccagcttacctccaccgtg
ctccgagaaaaccctcggcaagctgctgagcacctccctgagcagaactctgagcccggc
tctgaatccgactacgtccataatcctcagatgcagatgtcctggctcggccagcagaag
atggaggaggtgaacaggaaagaacgcacagccatgaactacatgaaggcccgtagcgga
gtacgacagactgtacgtgggctcatggaggacgacgcagagcccatctttgaggatgtc
atgatgtcgtcgcgaggtcagctggaagacatgagtgaggaattcgaggacaccatggtc
attgatctgcctccatccaggaacaggcgggagagagcagagctaagaccagacttcttt
gactctgcagccatgattgaggatgagtcgggtttcacgatgcccatgttctga
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