Garra rufa (doctor fish): 141343586
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Entry
141343586 CDS
T11039
Symbol
pccb
Name
(RefSeq) propionyl-CoA carboxylase beta chain, mitochondrial
KO
K01966
propionyl-CoA carboxylase beta subunit [EC:
6.4.1.3
2.1.3.15
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00280
Valine, leucine and isoleucine degradation
grf00630
Glyoxylate and dicarboxylate metabolism
grf00640
Propanoate metabolism
grf01100
Metabolic pathways
grf01200
Carbon metabolism
Module
grf_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
141343586 (pccb)
00640 Propanoate metabolism
141343586 (pccb)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
141343586 (pccb)
Enzymes [BR:
grf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
141343586 (pccb)
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
141343586 (pccb)
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Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-GeneID:
141343586
NCBI-ProteinID:
XP_073704254
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Position
10:27112915..27121110
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AA seq
552 aa
AA seq
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MATYTLIRSSLGLINSLKCSFKRVGQIPITQSKVLQNARCYSVSHLSVQERIEKKRKAAL
TGGGQMRIAAQHKRGKLTARERLELLLDPDSFVEYDMFVEHRCSDFGMEADQNKYPGDSV
VTGQGRINGRLVYVFSQDFTVFGGSLSGAHAQKVCKIMDQAMMMGAPVIGLNDSGGARIQ
EGVESLAGYADIFLRNVMASGVVPQISLIMGPCAGGAVYSPALTDFTFMVKDTSYLFITG
PDVVKSVTNEDVTQEELGGAKTHTTVSGVAHRAFENDVDALLNLRDFFNFLPLSNKDPAP
VTECHDPRDRLVPGLDTIVPFESTKAYDMLDIVHGIVDEREFFEIMPNYAKNIVVGFARM
NGRTVGIVGNQPKVASGCLDINSSVKGARFVRFCDAFNIPIITFVDVPGFLPGTAQEYGG
IIRHGAKLLYAFAEATVPKITVITRKAYGGAYDVMSSKHLRGDVNYAWPSAEVAVMGAKG
AVQIIFRGKENQAEAEAEYVEKFANPFPAAVRGFVDDIIQPSTTRRRICRDLEVLASKKQ
TNPWKKHANIPL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctacacgttaattcgaagcagcctgggactaataaacagtcttaaatgttct
tttaaacgtgttggtcagattccgattacccagtcgaaagtgctgcaaaatgcacgatgc
tattcggtcagtcacctgtctgtgcaggagagaatcgagaagaaacgaaaggcagcgcta
acaggaggaggacagatgaggatagctgcacagcacaaaaggggtaaactgacagcgaga
gagagactggagctcctgctggaccctgactcgtttgtggagtatgacatgtttgtggag
catcgctgttctgactttggcatggaggcagatcaaaacaagtatccaggagacagtgta
gtgactggacagggaaggatcaatggcagactggtctatgttttcagccaggacttcaca
gtgtttggaggcagtttatcaggagctcatgctcagaaggtctgcaagatcatggaccag
gcaatgatgatgggagctccagtaatcggtcttaatgactccggtggagcccgcattcag
gaaggcgttgagtccctcgcaggatatgctgacattttcttgcggaatgtgatggcctca
ggtgtagttcctcagatctctctcatcatgggcccatgtgcgggtggtgccgtatactcg
cctgctctgacagacttcactttcatggtgaaggacacctcctatctttttatcacaggc
ccagatgtggtaaagtctgtaacaaatgaggatgttactcaggaggagctgggtggagca
aaaacccacaccactgtgtcaggtgttgctcatcgggcctttgagaatgatgtcgatgcc
cttttaaacttgcgagacttttttaactttctcccactgagcaacaaagacccagctccg
gtcactgagtgccatgatccacgtgaccggctggttcctggtttggacactattgttcct
tttgaaagcacaaaagcctatgacatgctggacattgttcatggtattgtagatgagaga
gaattctttgaaattatgcccaactacgccaaaaatattgtggtgggatttgccaggatg
aatggtcgaactgtaggaatagtgggaaaccagcctaaagtggcatctggctgtttggac
ataaattcatctgttaaaggggctcgctttgttcgtttctgtgacgccttcaacattccc
atcatcacatttgtggatgtgcctggattcctgccaggcacagctcaggagtacggaggc
atcatcagacacggagccaaactgctgtatgcatttgcagaggccaccgttccaaaaatc
actgtcatcaccaggaaggcatatggaggtgcttatgatgtgatgagttccaaacatctg
agaggagatgtcaactatgcctggccaagtgctgaggtggcagtgatgggtgcaaagggt
gctgttcaaatcatcttcagaggaaaggagaatcaagctgaggctgaagctgaatatgtg
gagaagtttgccaatcccttccccgctgctgtcagaggctttgtggatgacattattcag
ccctcgaccacacgcagaaggatctgtagagacctagaggtgctcgccagcaagaaacag
accaacccctggaaaaaacatgccaacattcccttgtaa
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