Garra rufa (doctor fish): 141343684
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Entry
141343684 CDS
T11039
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141343684
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141343684
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141343684
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141343684
NCBI-ProteinID:
XP_073704392
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Position
10:complement(20678797..20686206)
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AA seq
536 aa
AA seq
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MMVVSTYIGIYYNVVICIAFYYFFMSMTNLLPWTYCNNPWNTPDCVGVAGTTRANATFAN
MSAVVSGVTEIVNRTKRTSPSEEYWRNYVLNVSDGIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLDGAVSGIKYYLTPQWEKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCFRDSIIISVTNCGTSVYAGFVIFSILGFMANH
LGVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAV
VDEIGTDWIIKNKTYVTLGVAIIGFLLGVPLTSQAGIYWLLLMDNYAASFSLVVISCIMC
ICIMYVYGHKNYFRDVEMMLGFPPPIFFRICWRYVSPFIITFILIFTVIQYKPITYNEYV
YPGWSLVIGFAMALSSVICIPIYALFKIATSEGSTFLERLKNSVRPDPDWGPALQEHRKG
RYATMGPESVEVCPLKEELRDEGKEKLKEKETEKKDEIGLTIPGSNGSTLNPTPSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatggtggtatctacctacatagggatttactacaacgtggtgatttgcattgcattc
tattacttcttcatgtccatgacaaacctgctgccctggacgtactgtaacaacccatgg
aacacccctgactgcgttggggtggcgggcactacacgagctaatgccaccttcgccaac
atgtctgctgtcgtgtcaggggtgacagagatagtcaaccgcaccaaaaggaccagtcct
agtgaagagtactggaggaactatgtgctgaatgtctctgatggtatcgggaacttcggg
gaggtgcgtctacctatcctgggatgtctggctgtgtcatgggtggttgtgttcctctgt
cttattcgtggagtcaagtcatcaggcaaggtggtgtatttcacagcaacattcccttat
gtggtgctgaccattctcttcatcagaggaatcactctggatggagccgtcagtggtatc
aaatactatttaacccctcagtgggagaaaattctagatgccaaggtatggggagatgct
gcatctcagattttctattcgctgggctgtgcctggggtggccttatcaccatggcatca
tataacaagttccacaataactgttttagagacagtattatcatcagtgtaacgaactgt
ggtaccagtgtgtatgctggctttgttattttctccatcctgggattcatggctaatcat
ctgggggtggatgtgtcagaggtggctgatcatgggccaggcctggcatttgtggcctac
ccagaggcactgacattgctgcccatatcaccactctggtccctgctgttcttcttcatg
ctcattttattgggcctgggcactcagttctgtctactggagactctggtgacagctgtc
gtagatgagattggaactgactggattatcaaaaataagacctatgtcacgctgggagtc
gccatcataggattcctccttggagtaccgctgacctcacaggcaggaatatactggttg
ctgcttatggacaactacgctgccagtttctccctggtcgtcatctcttgcatcatgtgc
atttgtataatgtatgtctatggtcacaagaactattttagagatgtggagatgatgcta
ggcttccctcctccaatcttcttcaggatctgctggagatatgtgtcccctttcattatt
actttcattttgattttcaccgtgatacagtacaagcctattacctataatgaatatgtc
taccccggttggtcattagtcattggctttgccatggctttgtcttcagtcatctgtata
cctatttatgctctgttcaagattgctacgtctgaaggatccacatttttagagcgtttg
aagaactctgtacggcccgacccggactggggcccggctctccaggagcaccgcaagggc
cgatacgccactatgggccctgagtctgtagaggtgtgccctctcaaagaagagctgagg
gacgaggggaaagagaaactcaaggagaaagagacggagaaaaaggatgagatcggtttg
accatcccaggaagcaacggctccacattaaaccccacacccagcgcatag
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