KEGG   Garra rufa (doctor fish): 141343717
Entry
141343717         CDS       T11039                                 
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
  KO
K13088  ELAV-like protein 1
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141343717 (elavl1a)
   03041 Spliceosome [BR:grf03041]
    141343717 (elavl1a)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     141343717 (elavl1a)
   mRNA cycle factors
    Stress granule specific factors
     141343717 (elavl1a)
Spliceosome [BR:grf03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    141343717 (elavl1a)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 BRAP2 RRM_7 BA_2335-like
Other DBs
NCBI-GeneID: 141343717
NCBI-ProteinID: XP_073704445
LinkDB
Position
10:complement(14854387..14863148)
AA seq 342 aa
MAIRRGHVRYIKEVYDMSNGYEDHMADEPKDAKTNLIINYLPQNMSQDELRSLFSSIGEV
ESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDVIKDA
NLYISGLPKTMTQKDVEEMFTRYGRIINSRVLVDQGSAGLSRGVAFIRFDKRSEAEDAIK
DLNGQKPQGAGEPITVKFAATPNQAKNSQIIPPIYHTQPRRFGGPVHHQAQRFRFSPMSV
DHMSGGMSGVNVPGNSSSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKC
KGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKSHK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atggcaatcagaaggggacacgttagatacataaaagaggtctatgacatgtcgaacggt
tacgaagatcacatggccgatgagcctaaagatgccaaaaccaacctcatcatcaactac
ttgcctcagaatatgagccaagatgagctgcggagtctcttcagcagcattggggaggtg
gagtctgctaaacttattcgggataaagtagcaggccacagtttagggtacggatttgtt
aactatcttaaccctagtgatgcagaaagagcaatcagtactctcaatggattgagacta
cagtctaaaactatcaaggtgtcatatgccaggccaagctctgatgtcataaaggatgcc
aacctttacatcagtgggctgcctaaaacaatgacgcagaaagacgttgaagaaatgttt
acgcgttatggcagaataatcaactcccgtgtgcttgttgaccaagggtcagcaggactc
tctcgcggggtggctttcattcgttttgacaagagatcagaggcggaggatgcgattaag
gacttgaacgggcagaagccgcaaggcgctggagagccaatcactgttaagttcgctgcc
actcccaaccaagcgaagaactcacagattattccaccgatttaccacacacagcctcgc
cgctttggcgggcccgtccaccaccaggcccagagattcaggttctctccaatgagtgtg
gaccacatgtctggtggcatgtctggggttaacgtgcccggaaactcctcgtcaggctgg
tgcattttcgtctacaacctgggccaggatgcagatgagggcatcctgtggcagatgttc
gggcccttcggtgcagtcacaaatgtcaaagtgatccgcgacttcaacaccaacaagtgc
aaaggatttgggtttgttactatgacaaactatgaagaggcagccatggctatcgccagc
ctcaacggctaccgcctcggggacaagattttacaagtgtcgtttaaaacgagcaagtcg
cacaagtag

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