Garra rufa (doctor fish): 141343717
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Entry
141343717 CDS
T11039
Symbol
elavl1a
Name
(RefSeq) ELAV-like protein 1a isoform X1
KO
K13088
ELAV-like protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141343717 (elavl1a)
03041 Spliceosome [BR:
grf03041
]
141343717 (elavl1a)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
141343717 (elavl1a)
mRNA cycle factors
Stress granule specific factors
141343717 (elavl1a)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
General mRNP proteins
141343717 (elavl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_10
BRAP2
RRM_7
BA_2335-like
Motif
Other DBs
NCBI-GeneID:
141343717
NCBI-ProteinID:
XP_073704445
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All DBs
Position
10:complement(14854387..14863148)
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AA seq
342 aa
AA seq
DB search
MAIRRGHVRYIKEVYDMSNGYEDHMADEPKDAKTNLIINYLPQNMSQDELRSLFSSIGEV
ESAKLIRDKVAGHSLGYGFVNYLNPSDAERAISTLNGLRLQSKTIKVSYARPSSDVIKDA
NLYISGLPKTMTQKDVEEMFTRYGRIINSRVLVDQGSAGLSRGVAFIRFDKRSEAEDAIK
DLNGQKPQGAGEPITVKFAATPNQAKNSQIIPPIYHTQPRRFGGPVHHQAQRFRFSPMSV
DHMSGGMSGVNVPGNSSSGWCIFVYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKC
KGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTSKSHK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcagaaggggacacgttagatacataaaagaggtctatgacatgtcgaacggt
tacgaagatcacatggccgatgagcctaaagatgccaaaaccaacctcatcatcaactac
ttgcctcagaatatgagccaagatgagctgcggagtctcttcagcagcattggggaggtg
gagtctgctaaacttattcgggataaagtagcaggccacagtttagggtacggatttgtt
aactatcttaaccctagtgatgcagaaagagcaatcagtactctcaatggattgagacta
cagtctaaaactatcaaggtgtcatatgccaggccaagctctgatgtcataaaggatgcc
aacctttacatcagtgggctgcctaaaacaatgacgcagaaagacgttgaagaaatgttt
acgcgttatggcagaataatcaactcccgtgtgcttgttgaccaagggtcagcaggactc
tctcgcggggtggctttcattcgttttgacaagagatcagaggcggaggatgcgattaag
gacttgaacgggcagaagccgcaaggcgctggagagccaatcactgttaagttcgctgcc
actcccaaccaagcgaagaactcacagattattccaccgatttaccacacacagcctcgc
cgctttggcgggcccgtccaccaccaggcccagagattcaggttctctccaatgagtgtg
gaccacatgtctggtggcatgtctggggttaacgtgcccggaaactcctcgtcaggctgg
tgcattttcgtctacaacctgggccaggatgcagatgagggcatcctgtggcagatgttc
gggcccttcggtgcagtcacaaatgtcaaagtgatccgcgacttcaacaccaacaagtgc
aaaggatttgggtttgttactatgacaaactatgaagaggcagccatggctatcgccagc
ctcaacggctaccgcctcggggacaagattttacaagtgtcgtttaaaacgagcaagtcg
cacaagtag
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integrated database retrieval system