Garra rufa (doctor fish): 141343777
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Entry
141343777 CDS
T11039
Symbol
rnps1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141343777 (rnps1)
03015 mRNA surveillance pathway
141343777 (rnps1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141343777 (rnps1)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141343777 (rnps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_5
KdpD
Motif
Other DBs
NCBI-GeneID:
141343777
NCBI-ProteinID:
XP_073704524
LinkDB
All DBs
Position
1:complement(20029568..20039578)
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AA seq
285 aa
AA seq
DB search
MAPSPTKRRERSEDKPRERAKEKAAGKEGAEKERGRDKIRKRRSNSTGSSSSRSRSSSSS
SSSSGSSSGSSSGSSSSSGSSRSGSSSSSRSSSSSGSSGSPSPSRRRHDNRRRSRSKSKS
QKRTDEKERKRRSPSPKPTKLHLGRLTRNVTKEHIQEIFSTYGKIKMIDMPPDRLHPNLS
KGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAVLAQRIRPAPRRPSPPRRMPPPPPM
WRRTPPRMRRRSRSPRRRSPVRRRSRSRSPGRRRHRSRSSSNSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctccatcaccaaccaagcgcagagagcgttcagaggacaaacccagggaacgagca
aaggaaaaggctgctggtaaagagggagcggagaaggagcgaggccgtgacaagatccgc
aaacgccgcagcaactccaccgggagcagcagtagcagatccaggtccagttccagctcc
agcagcagttctggatccagctcgggctcgtccagtgggtccagctcttcttctggttcc
agccgctctgggtcatccagttcctctcgctcttctagttcatcagggtcctctgggtct
cccagcccaagccgccgtcgacatgataaccgacgccgctcacgatcaaagtccaagtca
caaaagcggactgatgagaaagagagaaagaggaggagcccgagccccaaacccaccaaa
cttcatctgggaagactcacaaggaacgtaaccaaggaacatattcaagagatcttttcg
acttatggcaagatcaagatgattgacatgcccccagatcgtttgcacccgaatctgtca
aagggttatgcttatgtggagtatgagtctccggaggatgcccagaaagccctcaaacac
atggacggaggtcagattgatggtcaggaaatcacagccacggctgttctggcccagagg
atacgacctgccccgagaagaccatcacctccacgccgaatgcctccaccgcctcccatg
tggcgccgcacgccgcctcgcatgaggagaaggtctcggtctccgcggcgccgctcgcca
gtgagaagacgttctcgctccaggtcaccgggtcgcaggcgtcatcgttcccgctccagt
tccaactcgtcccgttaa
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