Garra rufa (doctor fish): 141343823
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Entry
141343823 CDS
T11039
Name
(RefSeq) protein strawberry notch homolog 2-like
KO
K26273
protein strawberry notch
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141343823
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141343823
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
141343823
NCBI-ProteinID:
XP_073704582
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All DBs
Position
10:complement(3933820..3976485)
Genome browser
AA seq
1594 aa
AA seq
DB search
MATLTRKWLENDRGLTRDHVSARSLMPTLAKSVVMDTEDFLHPEGPQLGSPKFSAPSPPL
TSSMESQLYPSNSWTYPQQTQYNQHYPMQSGRQLQPNPSSVNLDLSDMDFQDLVQNGDFS
QDLCIDELSNTSLFSSPSDSLSEYPDPSGFGPDSLAQLPAEGPAPQMYWDIPGHSQRQQN
LSAFPGRLDDFSAILSASVAGFKAAAAPPPLLPPVEEEEEADEEETEELGHADTYAEYKP
SKSTIGISHPDIVVETNTLSSVPPPDITYTLSIPDSAINSGLLSALQLEAIVYACQQHEV
ILQNGQRAGFLIGDGAGVGKGRTVAGIILENFLKGRKKALWFSVSNDLKYDAERDLKDID
APNIPVFALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRLKQILDWCKPNFDGVI
VFDECHKAKNATSTKMGKAVLDLQSKLPRARVVYASATGASEPKNMIYMSRLGIWGQGTP
FKAFDDFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRIEEITLDEPFKQVYN
KAARLWAEALELFTRAADTLGLASRKSLWGQFWSSHQRFFKYLCIAAKVSRLVELAHTEM
QHGKCIVIGLQSTGEARTREVLDENDGHLDRFVSAAEGVFQSLVQKHFPIQKPKREKSAA
SKRKRKPKGRPSKFPKHCVEVGGVIKISDDSDSDSDEIDSVSNSSPESLQDNDDVIFVNH
INGPAAKLEELKQRLLCKIAELGKELPLNTLDDLIDRFGGPEKVSEMTGRKGRVVRRDGS
VRYETRAEQGLTIDHVNVREKERFMTGEKLIAIISEAASSGISIQADKRVQNRRRRVHMT
LELPWSADRAIQQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDR
RATESRDLSQYNFENKYGTKALDKITKAILGHIDNKVPPPKGYLGGPIMFFRDMKKGMID
VGIFCKEPRLGLNTEKDCTITKFLNRILGLEVHQQNSLFQYFTDNFDYLINKDKKEGKYD
MGILDLAPGNDEIHEETQEKFLTPGNPQEGQVILYKISVDRGMPWEEACSKAEKLTGDYE
GFYLSNKLRGSQPCVLLAEQGRGRNLILYKPNIGKQAHPENLDNLLLRYYKVTPDEAKDL
WETQFVFSFTNCTHANWKGNCKMIEQGQECFLGMRLRQYHMLCGALLRVWKRVSDIVSDI
TNSSILQIVRLKTKQNSKQVGIKIPENCVSRVRAELSRMDEEVKKARREREQVANDQRLR
QEMLAKMLNARKLMANPSHSLQNRLHYQRSLLPPVAKPKSEAINEVLDLTISPCPSPDIK
TPAPDLNGMRGRPCPSVPETFNLEDLISQEQQRHRQVALNPNVRMSATHIPQQHIHTLKQ
NHSSFGVLTQQQQQQSVSRAQPSAQYSTLLSQLHRGQDTSLMLRLLTQMQQQTGVSAQSQ
RTSNAHLFSSHAQLSKQHAQPSQPLAVQSHVPQPATERTNDEFEFDDLDFSYHSPDSQLQ
HPFSSQALPSLTPPPPPYSSSLFASAPTSSSLSDSSSSSSHFTPSSSSSEQTHLLPNGHG
NMDALETLDHMIHGTPSDHRQSVIQFKTMDWDAT
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgttgaccaggaaatggctggagaatgacaggggtttgacacgtgaccatgtt
tctgctcggagcctgatgcccactcttgccaagtctgttgtcatggacacggaggacttt
ctgcaccctgagggccctcagttggggagcccaaagtttagcgctcccagtcctcctctc
acaagttccatggagagtcagctgtatccgtctaactcatggacgtacccacagcaaact
caatacaaccagcactatcctatgcaatctgggaggcagctccagccgaacccgtcgtct
gtgaacctggacctgtctgacatggactttcaagaccttgtgcagaatggagatttctcc
caggacctttgcatagacgagctgtccaacacatcgctgttctcctcgccatctgattct
ctgtcggagtacccagacccttcaggatttggcccggatagcctggcacagttacccgct
gaaggccctgcgccacaaatgtactgggacatacctggacacagtcagagacagcagaac
ctgagtgcatttcctggtaggttggatgacttcagtgctatcctgtctgcgtcggtcgca
ggatttaaggctgctgctgctcctccgccgctgctgccgccagtggaggaagaggaggag
gcagatgaggaagagacggaggagttggggcatgcggacacatacgccgaatacaagcca
tcaaaatctaccataggaatctctcatcctgacatcgtggtggagaccaacacactgtcc
agcgttcctccgcctgacatcacctacacactgtccattccagacagcgccattaactcc
ggcctgctgtccgccctgcagctagaggccatcgtctacgcttgccagcaacacgaggtg
attctgcagaacggccagcgagcggggtttctgatcggagacggagccggcgtcgggaag
ggccgcactgtggccggaatcatactggagaatttcttaaagggacggaagaaagcgcta
tggttcagtgtgtcaaatgacctgaagtacgatgctgagagagatctcaaagatatagat
gctcccaacatccctgtgtttgctttaaataagattaaatacggagatacggctacctca
gagggcgttttattcgccacatactcagcgctgatcggagaaagccaggccggagggcag
caccgcaccagactcaaacagattctggactggtgcaaacccaactttgatggagttatt
gtgtttgatgagtgccataaggctaaaaatgcaacctccaccaagatgggtaaagccgtc
ctggacttgcagagcaaactgccccgggcgagagtggtgtatgctagtgccacaggtgct
tctgagccaaagaatatgatatacatgagccgactggggatctggggacaaggaacgccg
ttcaaggcgtttgatgacttcctgcatgctatagagaagaggggtgttggtgctatggaa
attgtcgccatggacatgaaagtgagtggcatgtatatcgcacggcagctgagcttttcc
ggcgtctcctttcgcatagaggagataacactggacgaaccgttcaaacaggtctacaac
aaagcagctagactgtgggctgaggctctcgagttattcaccagagccgcagatacgttg
ggtctggcctcccgtaagtctctttggggtcagttctggtcgtcacaccagaggtttttt
aagtacctctgcatcgctgctaaagtcagtcgcctggttgaactcgctcatactgagatg
cagcacggcaagtgcatcgtgattggcctgcagtccacaggagaggctcgtactcgagag
gtcctggatgagaacgacggtcacctggacagattcgtctccgctgctgagggtgttttc
cagtcattagttcagaaacacttcccaatacagaaacccaaaagagagaaaagcgccgca
agcaaaaggaaacgaaaacccaaaggccggccttcaaaattcccaaagcactgtgtggaa
gtgggcggagttattaaaatcagcgacgactcggattccgactctgacgagattgacagc
gtctctaactcctcccccgaatcactacaggacaacgacgatgtgatttttgtgaaccac
atcaacggacctgctgctaaactagaagagctcaagcagaggctgctgtgtaaaatagca
gagttggggaaggagctgccactcaacactctcgatgacctgatcgacaggtttggagga
ccagagaaggtgtctgagatgacgggtcgtaagggacgtgtagtgcggcgtgatggcagt
gttcgatatgagaccagagcagaacagggcctgaccatcgaccacgtcaacgtcagagag
aaagagcgcttcatgacaggagagaagctgatcgccatcatctctgaagcggcgagttcg
ggcatctctatacaggcggataaacgtgtgcagaaccgcaggagacgagttcacatgacc
ttagagttgccgtggagcgccgaccgcgccattcagcagttcggtcgaacgcatcggtca
aatcaggttacggctccagagtatatcttcctcatctctgagctggctggagagagacgc
ttcgcctctatcgttgccaagagattggagagcctgggggcactgacacatggggatcga
cgagccactgaatccagagacctgagccagtacaacttcgagaacaaatacggcaccaaa
gctttggataagatcactaaagccatcctcgggcacatcgacaacaaagtccctccaccg
aagggctacctaggaggacccatcatgttcttcagagatatgaagaaaggcatgattgat
gtgggaatcttttgcaaggagcctcgtctaggtctgaatacagagaaagactgcaccatc
actaagtttctgaaccgtattttgggtttggaagtccatcagcagaactctctgttccag
tacttcaccgataacttcgactacttgatcaacaaggacaagaaagagggaaaatatgac
atgggaatattggatcttgctcctggtaatgatgagattcatgaggaaacgcaagagaag
tttctaactccaggaaaccctcaggagggccaggtcatcctctataagatcagtgtggat
cgtgggatgccctgggaagaggcctgcagtaaagcagaaaaactcactggagactatgaa
ggcttttacctctcaaacaagctgcgtgggagtcagccgtgcgtcctgcttgctgaacaa
ggtcggggtcgcaatctcatcctgtataagcccaacatcggtaaacaggctcatcctgag
aacctggacaacctgctgctgagatactacaaggtgacgcctgatgaagcgaaggattta
tgggagactcagtttgtcttttctttcaccaactgcacacatgccaactggaagggtaat
tgtaagatgatcgaacagggccaggagtgttttctggggatgcgtctcaggcagtatcac
atgttgtgcggagcgctgctgagggtttggaaacgagtgtctgacatcgtctcggacatc
accaactccagcatcctgcagatcgtacggctcaaaaccaaacagaacagcaagcaagtt
ggtataaaaatcccagagaactgcgtatcccgtgtgcgcgccgagctctctcggatggat
gaagaggtgaagaaagcccgtcgagagagagagcaagtcgcaaacgaccagcgcctgcgc
caagagatgctggccaagatgctcaatgcccgcaagctcatggcaaacccttcccactcc
cttcagaaccgtcttcactaccaacgatcccttttaccccctgtggcaaagccgaagagc
gaagccatcaacgaggtcttggatctaaccatcagcccctgcccatcgccggacatcaaa
acgccagcgccagacctaaacggcatgagaggacggccgtgcccgtctgttcccgagacg
ttcaacctggaagatttgatctcccaggagcagcaaagacacagacaggtggcgttgaac
ccgaacgtgcgcatgtcggcaacacacatcccacagcagcacattcacacactaaagcaa
aatcattcgtcgttcggggtgctgacgcaacagcagcagcaacagagcgtctcacgcgcg
caaccgtctgcgcagtacagcacgcttctctcgcagctgcatcgagggcaagacacgtcg
ctcatgctgcggcttctcacacagatgcaacagcaaaccggcgtgtcggcgcaatcccag
cgcacatctaacgcacacttgtttagctcacacgcacagctatcgaagcaacatgcgcag
ccgtcgcaacccctagccgtgcagtcgcacgtccctcagcctgctacagaaagaacaaac
gacgagttcgaattcgacgacttagacttcagttaccactcgcccgattcgcaacttcag
cacccgttctcctcacaagccctgccatccttgactccgccccctcctccttactcctcc
tccctctttgcttcggcgccgacaagctcctccctctcagactctagctcctcctcctcc
cacttcacgccttcgtcctcttcctccgaacagacgcatctgttaccgaacggccacggc
aatatggacgccctggagacgctagatcacatgatccacgggacgccctcggatcaccgg
cagtccgtcatccagttcaaaacgatggactgggacgccacctag
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