Garra rufa (doctor fish): 141343845
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Entry
141343845 CDS
T11039
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141343845
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
141343845
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
RXLR
Motif
Other DBs
NCBI-GeneID:
141343845
NCBI-ProteinID:
XP_073704608
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All DBs
Position
10:5911848..5998826
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AA seq
1096 aa
AA seq
DB search
MDRNELSPGSDVAMTKKAAHKSAPAYHCTGNSTSAKSCLESNSDAAGSNPKPNHVAMEET
DDAEEESKFQHPRLRRTGGGSSVQIKSCAPGGGGGGAGGGGGGASRSSTSTDARPGDGDA
AAAAPAGRHDTVKGGGGGSKASTVVATVTVEACNAAEGDGNLSTTLSSMKCNKNGECRRD
SGTGSLRSIMSKPDGIRRAACNSTTSVDATSTQGQDASYPGVPEKKDSKVSFSNAPSRKA
SSSIHGAQQQPRNSVTFLKSEDGAQEDGETRGSQASFMQRQFSSMLQPGVNKFSLRMYGS
QKAVEKEQERVKSAGNWIIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITFFKEETTTPWI
IFNVVSDTFFLMDLVLNFRTGIIIEDNSDIILDPKTIKKKYLKTWFIVDFVSSIPVDYIF
LIVEKGIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVM
RIINLIAMMLLLCHWDGCLQFLVPMLQDFPSDSWVSLNKMVNDTWSELYSFAVFKAMSHM
LCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATALIQSLDSSRRQYQEKVKQFQQ
LPLPQTDTKPYLSGFTELSLPPAATQNSLRKQDKTVPGQRRQVLEGFFTLEIVNFNCRKL
VASMPLFANAEPNFVTAMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVNVITKGTVG
MKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEEYPMMRRAFETVAID
RLDRLGKKNSILMNKVQHDLNSGILNNRENEMIQEIVKYDREMVKLIDLQRPRAMSMTPS
IPGGMFAPGGSQGGSSAIATLQQAVAMSFCPQFGPMVGPSTMQSPRMVRRFQVVQNLASP
VAVSPQPSQLGLGAFAGVAMASPPVQSPLAAAGARTFQYGSGPMGARSGSQLSLIQQHVP
SPTRPKGTQPLHQTGSLTQDARALSASQPSLPQDGAPPVAPSPPPSTHVSSTSIGPPQAP
HPAIPGPSGVRSAVLQRMGLPHQASAAAVGSYPSPPPPTGTPPAVAGPDSVIRKKDSIVS
LPETDFTARSRLSSNL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggaccggaatgagctctcgcccggttcggatgttgccatgacgaagaaagcggcccat
aagagcgcgcccgcgtaccactgcaccgggaacagcactagcgccaagagttgcctggag
tccaactcggatgccgccgggtcgaacccgaaacccaatcacgtcgccatggaggagacg
gacgacgcggaagaggaatccaagtttcagcatccgcggctgaggaggacgggaggaggg
agcagcgtccagattaagagctgcgcgccgggaggaggagggggaggagcaggaggagga
ggaggaggcgcgtccaggagctccacttccactgatgcgcgcccgggtgatggtgatgct
gctgctgctgctcctgcgggtcgccacgacaccgttaagggcggaggaggaggaagcaaa
gcgtctaccgtagtggccaccgtgacggtagaggcttgtaatgctgctgaaggtgacggc
aatctttcaacaacgctttccagcatgaaatgcaacaagaacggggagtgcaggcgggac
tccggcaccgggagcctccgctccatcatgtccaagccggacgggatcaggcgcgcagcc
tgcaattcaacgaccagcgtggacgcgaccagcacgcagggacaggacgcctcgtacccc
ggggtcccggagaagaaggattccaaagtgtccttttccaacgcccccagcaggaaagcc
tcgtcctccatccacggcgcgcagcagcagccccgcaactcggtgacgttcctcaaatcc
gaggatggagctcaggaggacggcgagacccggggcagccaggcgagcttcatgcagcgg
caattcagcagcatgttgcagcctggggtcaataaattctccctgcgcatgtacgggagc
cagaaggcggtcgagaaggagcaggagcgtgtcaaatcggcgggcaactggatcattcac
ccatacagcgacttcaggttctactgggatttcaccatgcttctcttcatggtgggcaac
ctgatcattattcctgttggcatcaccttcttcaaagaagagacgactacgccctggatc
atctttaacgtggtctctgacaccttcttcctcatggacctggtgctcaactttcgcacg
ggtatcattattgaggacaattctgacattatcctggacccaaagaccatcaagaagaag
tacctaaagacctggtttattgtggactttgtctcatccattccggtggattatatcttc
ctgatcgtggagaaaggcatagactcggaggtgtataagacggcgcgagccctgaggatt
gtgcgtttcactaaaatcctgagcttgctgaggctgctgcgtctctcccggcttatccgc
tatattcaccagtgggaagagatcttccatatgacgtatgacctggcgagcgcagtgatg
cggattattaatttgatagcgatgatgctgttgctgtgccactgggacgggtgcctgcag
tttctggtgcccatgctgcaagacttcccctcagacagttgggtctccctcaacaagatg
gtgaatgacacatggagtgagctgtactcatttgccgtgtttaaagccatgagtcacatg
ttgtgcataggttacggtcgtcaagctccagagagtctctctgatatctggctgacgatg
ctcagcatgatcgtcggtgccacttgctatgccgtctttatcggacacgccacggctctc
atccagtcgctggactcctcacgacgccagtaccaggagaaggtaaagcaatttcagcag
ctgccactgccgcagactgacaccaaaccgtatctctcgggtttcactgagctttcctta
ccgcccgctgctactcagaacagcctgaggaaacaggataaaactgttcccggacagaga
cgtcaggttctcgagggatttttcactttggaaatcgtgaacttcaactgccgtaagctg
gtggcctccatgcccctgttcgccaacgccgagcccaactttgtgacggccatgctgacc
aagctgcgtttcgaggtcttccaacccggcgattacatcatccgagagggaaccatcggc
aagaagatgtacttcatccagcacggcgtggtcaacgtcattaccaaaggaacggtcggc
atgaaactttcagacggctcctacttcggagagatctgtctgctgacgcggggccgtcgt
actgcgagtgtgcgagcggagacctactgtcgcctgtattcgctctccgtggacaatttt
aatgaggttttggaggagtatcccatgatgagaagggcctttgagaccgtagccattgac
cgactggaccgcttgggaaaaaagaactccatccttatgaacaaagtgcagcacgactta
aactctggcatcttaaacaaccgcgaaaacgagatgatccaagagatcgtgaagtacgac
cgcgagatggtgaagctgatcgacctgcagcgtccgcgcgccatgtccatgacgccctcc
atccccggcgggatgtttgctcctggtgggtcgcagggcggcagctccgccatcgctact
ctccagcaggcggtggcgatgagcttctgtccccaattcggtccgatggtaggtcccagc
accatgcagtcccctcgcatggtccgacggttccaagtagtgcaaaaccttgctagccca
gtggcggtttctcctcagccgtctcagctagggctcggtgcgttcgccggtgtcgctatg
gccagtccaccagttcaaagcccgctagcggcggcgggcgcacgaactttccagtacggg
agcggcccgatgggcgcacgctccggatctcagctgtcactcatccaacagcacgtcccc
agtcccacgcgtcccaaaggaacccaaccgctgcatcaaacagggagcctaacccaggat
gccagagccctctcagcttctcaaccctccctgccacaagatggcgctccaccggtcgct
ccaagccctccgccatcgacccacgtctcctcgacgtcgatcggtccaccccaagcaccc
catcctgccatcccagggccttctggggtccggagcgcagtgcttcagagaatggggctg
ccccatcaggcgtccgcagccgcggttgggagttatccatccccgccgccccctacaggc
actccgcccgccgtagcgggaccggactcggttatacgcaagaaggattccatagtcagc
cttcccgagacggacttcacagccagatcccgactatcgtccaacctctga
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