Garra rufa (doctor fish): 141343882
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Entry
141343882 CDS
T11039
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
grf Garra rufa (doctor fish)
Pathway
grf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141343882 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141343882 (gtf2b)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
141343882 (gtf2b)
Prokaryotic type
Archaeal type
TFB
141343882 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
141343882
NCBI-ProteinID:
XP_073704651
LinkDB
All DBs
Position
10:complement(29746678..29757198)
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AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPDALLVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagactctcttcccaaggtgcaatgccccaatcaccccgat
gcactcctggtggaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaattgatgtagggtcagagtggagaacgttcaccaatgagaaagca
actaaagacccgtctcgtgttggtgacgctcagaaccctctcctcaatggaggagacctc
accaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaattccaag
taccagaatcggagaaccatgagcagctctgatcgagccatgttgaatgccttcaaagag
atcaccaccatggccgacaggatcaacctcccccgaaacatcattgaccgaacaaacaac
ttgttcaaacaggtttacgaacagaagagtctgaaaggaagaagtaatgatgcgatcgct
tcggcctgcctttacatagcatgcagacaggagggtgtccctagaacgtttaaagaaatc
tgtgccgtgtctcggatctcaaagaaggagattggccgttgcttcaagcttatcctgaag
gctcttgagacgagtgtggacctcattacaaccggcgacttcatgtcacgtttctgctcc
aacctgggcttgccgaaacaggtgcagatggcggccacttacatcgccaggaaggccgtt
gaactggacttggttccaggacgcagcccgatctcagtggcagccgcagccatttacatg
gcctctcaagcatctgctgagaagaagacacagaaggagatcggggacatcgctggagtg
gcagacgtcaccatccgtcagtcctaccgtctcatttatccccgcgctgccgatctcttt
cctccagacttcaagttcgacacaccagtggataaactgcctcaactgtga
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