Garra rufa (doctor fish): 141343913
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Entry
141343913 CDS
T11039
Symbol
rpap2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141343913 (rpap2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141343913 (rpap2)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
141343913 (rpap2)
Protein phosphatases and associated proteins [BR:
grf01009
]
HAD phosphatases
Fcp/Scp phosphatases
141343913 (rpap2)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
141343913 (rpap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
141343913
NCBI-ProteinID:
XP_073704688
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Position
10:complement(34719724..34738300)
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AA seq
586 aa
AA seq
DB search
MEATGKIRVSKSKKKGGKGNQVISAADEARKREAIKEALRQKLELERKALQVVERLLEDS
VTEEFLVDCAWHITPVNYKDTVEERSIAKLCGYPTCPNKLTNVPTQQFKISTKTNRVYDI
TERKCFCSNFCYKASKCFELQISKIPLWLRKEERPPEVKLMKGGDRGSSGHEIKLVDKPV
TEADIENPVLDIPESKHSPPFSQSDNSDLEEDFVSSVVSRKCKHKRVHWGKLPKREEVSE
DGSSAENKQYAHPEPTPQPQIDPTASLSVPNKTTSGGSDVEGTLELLNQCSLKDNTTQQE
TNLPSQPASCLDITQVGMSKRGAAGLRSLLKDHNKAKTTPATISLCLLECLRQTFIEWRT
EETMKFLYGPDYASGTESSVQEVEELDEDDLDEVEVSLRQNSGSSSRPSAPAPDFETLRE
ETELLELRVREFYEGVYVLPEEIKTDVIKDTQDTQGSRKDPPLPLVDSHAQHLIQKRIAV
EKLSRSLRDVVGPLRLTMSDVINEVNNLVKTFRFTNTNIIHKGPEWTLIAVVLLSVLTEV
SPLLRESLASPSSLEYISSLMSELKLEDKDLHNLVLLFKPGVTPQR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaagctacaggaaagattcgagtctcaaaatcgaagaagaaaggtggaaagggaaac
caggtgatttcagctgcggatgaggcgagaaagagggaagctattaaagaggcgcttaga
cagaagcttgagttggagcgcaaagccctgcaggtggttgagcggctgctggaggacagt
gtgacagaggagttcctcgtcgattgtgcatggcacattactcctgtcaactacaaggac
acagtagaagaacggtccattgctaaactgtgtggatatcctacgtgtccaaataaacta
accaatgtacccactcaacagtttaaaatatccaccaaaaccaatagagtctatgatatt
acagagcgcaagtgtttttgcagtaatttctgctacaaagcctccaaatgttttgagctc
cagatatcaaaaattccactttggcttaggaaggaggagaggcctccagaggttaagctg
atgaaaggaggggacagaggtagctcaggacatgagataaagttggtagacaaacctgtg
acagaagctgacattgagaatcctgttctagacattcctgaatctaagcactcccctccc
tttagccaaagcgacaacagtgaccttgaggaagactttgtctccagtgtggtgtccaga
aagtgcaaacacaaacgagtacactggggaaaactgccaaagagggaggaagtgagtgag
gatgggtccagtgctgaaaataagcaatatgcacatcctgaacctactcctcaaccacag
atagaccctactgccagtctgtctgtaccaaataaaaccacatctggtggatctgatgtt
gaaggaactctggagcttttgaatcagtgtagtctgaaggacaatacaacccaacaggaa
actaacctcccttcacagcctgctagttgtttggacatcactcaggtgggcatgagtaag
agaggagctgcaggcctcagaagcttgttgaaggatcataacaaagctaaaacaactcct
gcaaccatcagtttgtgcctgctagagtgtctacgacaaacatttattgagtggagaact
gaggaaaccatgaagtttctttatgggcctgattatgcctctggaacagagtcttcagta
caggaagtggaggaactggatgaagatgacttggatgaggtggaagtgagcttgagacag
aacagtggaagttcttccagacccagtgctccagctcctgattttgaaacgctgcgagag
gagaccgagttgttggagctgagagtgagggaattttatgaaggcgtgtatgttctgcct
gaagagatcaagacagatgtaatcaaagacactcaggacacacagggcagtaggaaggac
cctcctctgccgttggttgattctcatgcacagcacctgattcagaagcgcattgctgtg
gagaagctcagccggagcttgagagatgttgtgggacccctgcgtctaacgatgagtgat
gtcatcaatgaagtaaataatttggtcaagacattcaggtttacaaacactaatatcatt
cacaaaggaccagaatggactttaattgctgtggttcttctgtcagtattaacagaagtg
tcaccattgctgagagagtcattggcaagtccatcttcattagagtacatctcctctctc
atgagcgagctgaaactggaggacaaagatctacacaaccttgtgctgctcttcaaaccc
ggtgttactccacaaagataa
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