Garra rufa (doctor fish): 141343930
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Entry
141343930 CDS
T11039
Symbol
myom1a
Name
(RefSeq) myomesin 1a (skelemin) isoform X1
KO
K24495
myomesin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141343930 (myom1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
grf04990
]
141343930 (myom1a)
Domain-containing proteins not elsewhere classified [BR:
grf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
141343930 (myom1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
141343930
NCBI-ProteinID:
XP_073704714
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All DBs
Position
10:complement(22764156..22800058)
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AA seq
1484 aa
AA seq
DB search
MSKSLKLQKEQQQRDLETHYESSYHQGSLSSVSRQSYATYVSRSSSHGHKISKKEKKLSA
VSKKEKRSYLGVDKEDEVIGYVVPVFRSSHLATQDLMESQEEVKEEGVGYVVMRNLFSRE
TDFKMRTVKKSRETSLRESAERMALSRKMHEKEEFQKKMNPDSLTHPPEFIVKPRGQTVW
EGKTVTLHCTVAGWPKPRVAWYKNNVLIDAKAHPEKYFTESQYNMHSLEIKNCNFSDTAE
YRISALNVKGENSAFASVIIKRFKEGEEVVERPHGFSPEYGVTFNTTIIDKFDVSFGREG
ETMSLGCTVIVYPTVKRYQPEIVWYRNGVALSPSKWVHMHWSGERATLTLVHLNKEDEGL
YTLRVNTKSGFDSHSAYVFVRDADVEEEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSS
SIIGYLIDRLEVGTHHWTQCNDTPVKYARFPVTGLIESRSYTFRVRALNNSGVSHPSRAS
DPVVAMDPSDRARLRAGPSAPWTGMIKFTEEDPTVGVVPGQPTDIAVTEATKSYVVLSWK
PPVQRGHEGVMYYVEKCLEGTDTWQRVNTGMPVKSPRFALFDLAEGKSYSFRVRSCNSAG
VGEPSEETGATTVGDRLDLPSVPGPVIPIRNTDTSVVVCWGASKEVKNLVGYYIEVSVNG
SGVWVPCNNKPVKGTRFVCHGLNTGDKCVFRVKAVNAAGYSGSSAESEACIVQASIAVPS
PPIAVTLQERVRDYMVLGWQAPAKTGGADIRGYYLDYRTVKDGVSSKWHEINLQAVTTTS
YKVTDLKENLFYQFQVRAVNQAGIGESSVPTVPLECKEWTVAVPGPPHGLRVQEVRKDSM
VLLWEPPTFNGRSPVTGYYVDYKEEKGRWRCVQERSTKNTYMKITGLQEGVSYRLRVHAK
NLAGVGGPSKSTDAILAETRPGTNEIVVDVDDDGVISMIFECADLKADSQFVWSKNYEAL
TDTSRLTIQTSGGKSRAIFNDPSLEDLGTYSCVVTNTDGVSASYTLTEEGLKRLLDISHD
HQFPIIPFKSEMAIELQEKGRVRFWAEVGKFTSNCQVEYVFNDNIVHEGKKYTMNFNKST
GIIEMFMDLLEVTDEGTFTFNLVDGKATGRTSLVLIGEEFAELQKKSEFERAEWVRRQGP
HFVEYLSFEVTPECDVHLKCKVGNIKPATEIAWLKDGLDIEEEDEDAKKIGKSDEVLIFD
IGKLVIKSEKAERKKKPATEESPSKPKISKKDAGVYEVKLKDERGKDTTLLNLTDAGYQA
VLNEVFRVIANSSTELKVMSTEHGIILYSFVVHYIEDLRVGWLHKESKISHSDRVQCGVT
GEQLWLKINEPTEKDKGKYAIDIFDGQGSVKRVLDLSGQAWDEAFEEFKRLKAAAIAERN
RARVLGGLPDVVTIQEGKSLNLTGNVWGDPVPEVSWIKNEKPLLPDSHYTLKFEHGKFAS
ITIAAVSTVDSGKYALLVKNKYGTEAAEFTVSVYIPEDGAEKKE
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaatccttaaaactacaaaaggaacagcagcaacgggaccttgagacgcactat
gagagcagctatcaccaaggctccttgtcatctgttagccgccagtcttatgctacttat
gtgagcagaagcagcagccatgggcacaagatttcaaagaaggagaagaaactgagcgct
gtctctaaaaaagaaaagcgctcatacctgggggtggacaaggaagacgaggtcattgga
tacgtcgtgccagtcttcagaagcagtcacttggctacccaggatctgatggagtctcag
gaggaggtgaaggaggagggtgtggggtatgtcgtcatgaggaacctgttctccagagag
actgacttcaagatgagaactgtgaagaagtccagagagaccagtttgagagagtctgct
gaacgcatggctctgagcaggaagatgcacgagaaagaagaattccaaaagaagatgaac
ccagacagtttgactcaccccccggagttcatcgtgaaaccacgtggccagaccgtgtgg
gaggggaagactgtgacgctgcactgcacagtggctggatggcccaaaccccgtgtggcc
tggtacaaaaacaatgttttaatcgatgctaaggctcaccctgagaaatacttcacagag
agccagtacaacatgcattctctggaaatcaagaattgtaattttagcgacactgctgag
taccgaatctctgcacttaacgtgaagggagaaaattctgcgtttgcctctgtcattatc
aaaagattcaaagaaggggaggaggtggttgaaaggccccatggtttcagccctgaatat
ggtgtgaccttcaacactaccatcattgacaagtttgacgtttcttttggccgtgaagga
gagaccatgagtttgggctgcacagtcattgtctacccgactgtgaagcgctaccagcca
gagatagtgtggtacagaaatggtgtcgccttgtcaccttctaagtgggtgcatatgcac
tggagtggtgagcgagccactttgacgcttgtgcatctgaataaagaagacgagggtctc
tatactctgcgtgtcaacaccaagtcaggcttcgacagccactctgcctatgtgtttgtc
agagatgctgatgtggaggaggagggggttcctgttgctcctcttgatgtgcgttgtcat
gacgctaataaagactatgtggttgttacctggaagcagcccgcagtggagggcagcagt
tccatcattggctatctcattgacaggttggaagttggcactcatcactggacccagtgt
aatgacactcctgtgaagtatgcccgttttcctgtcactgggcttattgagagccgctcc
tacacctttagggtgcgagctcttaataattctggtgtgagccacccgtcccgggcttct
gatcctgtagttgccatggatccatcagaccgggcccgccttagagctggtccctcagct
ccatggactggaatgatcaaattcactgaggaagaccccacagtgggagtggttcctggt
caacctactgacatcgctgtcactgaggctactaagagttacgtggtattgagctggaag
ccacccgtccagagaggacatgagggtgttatgtattatgtggagaagtgcttggagggt
acagatacatggcagagggtaaacactgggatgccagtgaagtccccccgctttgccctg
ttcgaccttgccgagggcaaatcctacagcttccgtgtccgtagctgcaactctgctgga
gttggagagccgtcggaagaaactggggcgactactgtgggagacagattggacctgcct
tcagttccagggcctgttattcccatcagaaacactgacacgtctgttgttgtgtgctgg
ggggcatctaaggaggttaagaatctggttggctattacatcgaggtcagcgtcaatggc
agtggcgtgtgggttccctgcaacaacaagcctgtcaaaggcactaggtttgtgtgccat
gggctgaacactggggacaaatgcgtgtttagggtgaaggctgtgaatgctgcaggatac
agtggaagcagcgccgaatctgaggcctgcattgtacaagcaagcattgccgtcccaagc
cctcccatcgctgtgaccctgcaggagagggtccgtgactacatggtgctgggctggcaa
gctcctgctaaaactggtggagcggacatcagaggttactacctggactacagaacagtg
aaggatggagtctcaagcaagtggcatgaaattaacctccaggcagtcactaccacatct
tacaaagtgacagacctgaaggaaaacctattctaccagttccaggtgcgtgcagtcaat
caggctggtattggtgaatcctccgtacccactgtccccttggagtgcaaggaatggact
gtggctgttccaggtcctccccatggcctccgtgtccaagaggtgcgtaaagactccatg
gtgcttctgtgggaaccacctacattcaatggccgcagtcctgtgactggatattatgtg
gactataaggaagagaagggcagatggagatgtgtccaagagagatccacaaaaaatact
tacatgaagataactggtctccaagagggtgtttcctacaggctgcgtgtccatgccaag
aatctggcaggtgtaggtggaccctcaaagtcaaccgatgctattttggctgaaacccgc
cctggaaccaatgagattgtggtggatgtggacgacgatggtgtgatctctatgatcttt
gagtgcgccgatcttaaagcagactctcagtttgtgtggtctaaaaactatgaggccctc
actgacacttctcgtctcaccattcagacttctgggggcaagtccagagccatctttaat
gacccatcattggaagacttgggcacttactcttgtgttgtgaccaatactgatggtgtc
tctgccagctacacgctcactgaggaaggactgaaacgcttgttggacatcagccatgac
caccagttccccataattcccttcaaaagcgaaatggccattgagctgcaggagaagggc
cgtgtgcgtttctgggccgaagttggcaagttcacttctaattgccaagtggagtatgtc
ttcaatgataatatcgttcatgaaggaaagaagtacacaatgaactttaacaaaagcact
ggcattattgagatgtttatggacttactggaggttactgatgaaggaaccttcacattc
aaccttgttgatggcaaagcaactggacgcaccagcttagtgcttattggagaagagttt
gctgagcttcagaagaaatctgagtttgagagagcagagtgggtcagaagacaaggtcct
cacttcgtggagtatctcagtttcgaggtcactcctgaatgtgacgtgcatctgaaatgc
aaggttggaaacatcaaacctgccactgagattgcctggttaaaggatggacttgatatt
gaagaggaggatgaggatgctaagaagattggaaagtctgatgaagtcttgatctttgat
atcggcaagcttgttattaagagtgaaaaggcagaacggaaaaagaaaccagcaaccgaa
gaaagcccaagcaagccaaaaatttcaaagaaagatgcaggagtgtatgaggttaaactg
aaggatgaaagaggaaaggacacaactttgctgaacctgacagatgcaggttatcaagca
gtgctgaatgaagtatttagggttattgccaattcttcaaccgagctcaaggttatgagc
acagaacacggaatcattctctactcctttgttgtgcactatattgaagatctccgtgtt
ggctggcttcacaaagaatcaaagatctcccactcagacagagtgcagtgtggagtcacc
ggagaacagctgtggctcaaaattaacgagcccaccgagaaggataagggcaaatatgcc
attgatatcttcgatggccaaggcagcgtcaagagagttcttgacctgtcaggacaagca
tgggatgaagcatttgaagaattcaagaggctgaaggcggcggccatagcagagagaaac
cgtgcccgtgtgctgggtggcctgcctgatgtagtcaccattcaagagggcaagtccctc
aaccttactggcaacgtatggggtgatcctgttcccgaggtcagctggattaagaatgaa
aaaccgctgttgcctgacagtcactacacgctgaagtttgagcacggcaagtttgccagc
atcaccatcgctgctgtttcaaccgtcgactcgggcaaatacgccctgctggtgaagaac
aagtatggcacagaggcggcagagttcaccgtcagtgtctacatcccagaggatggagca
gaaaagaaagagtaa
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