Garra rufa (doctor fish): 141343933
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Entry
141343933 CDS
T11039
Symbol
pld1a
Name
(RefSeq) phospholipase D1a
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00564
Glycerophospholipid metabolism
grf00565
Ether lipid metabolism
grf01100
Metabolic pathways
grf04144
Endocytosis
grf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
141343933 (pld1a)
00565 Ether lipid metabolism
141343933 (pld1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
141343933 (pld1a)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
141343933 (pld1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141343933 (pld1a)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
141343933 (pld1a)
Membrane trafficking [BR:
grf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
141343933 (pld1a)
Endosome - Golgi transport
Others
Others
141343933 (pld1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
Motif
Other DBs
NCBI-GeneID:
141343933
NCBI-ProteinID:
XP_073704720
LinkDB
All DBs
Position
10:complement(26683129..26728330)
Genome browser
AA seq
1023 aa
AA seq
DB search
MSDTVENLDTRDLGFSDAEDEPEEVDSEFNPSGVSRIPFYAVYRTIGFKETDALVYLTAV
PITAKILDVERFTRAPDRFSVSKHRGVSKAMPAVFKIELKHGNFTWIVKRKEKHFMELHR
ELLRYKTLMRIPLPTRSHTERRKSIKRSEVRQMPALPRGGGDELAREEQVSSRKKQLEDY
LNKLLRMAMYRKYYATMEFIDVSQLSFIQDLGPKGLEGIVYKRSGGHRIPGMNCCGHNEV
CYRWSKRWLVVKDSFLLYMKPDTGAISFVLLVDNEFSIKMDSKYTDTKHGVKIENLSRKL
VLKFTSFRHARWWGQAIESFVRKHGKAFLRTHRFGSFAREEENIPSKWYVNGKTYMEDVA
NALEEAKEEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVRIFVMLYKEVELA
LGINSEYSKRTLMHLHPNIKVMRHPDHVSSTVYLWAHHEKIVVIDQSVAFVGGIDLAYGR
WDDREHRLTDVGSVTRSVAQAMEQTQELDTSTPRKKGSTGGNSSRSMVGDSVDLPKLKGI
GRTRKTRFSLYHHIQRGLHHADSISSIDSTNKSGSVHSLQTGVGELMGNTRFWHGKDYCN
FVYKDWVQLDKPFDDFIDRYTTPRMPWHDISSVVHGKAARDVARHFIQRWNFTKIMKPKY
RSLSYPFLLPKSHTTANDIKYQVPDCVHTKVQVLRSAADWSAGTKHHEESIHNAYIQVIA
KSKHFIYIENQFFISCADNKHVYNKIGDAIIERIIRAHKEKKVFRVYVVTPLLPGFEGDI
TTGGGNALQAVMHFNLRTMNRGDYSIIAQLKKEMDDQWMNYISICGLRTHAELEGRLVTE
LIYVHSKLLIADDNTVIIGSANINDRSMLGKRDSEVAVIYEDSETTPSVMDGQEYQAGKF
ALQLRLECFKTILGAFTDPTIDVRDPISNAFYKDVWMSVSGRNATIYEKVFRCLPSSLVR
NKQELMSFQFKPGLDKEDPVKAQELLKKIRGFLVQFPLEFLCEENLMPSVGTKEAMVPTE
IWT
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacggtggaaaacctggacaccagagacctggggttctcagatgctgaggat
gaacctgaagaggtggactccgagttcaacccctcaggagtatcccgtatcccattctat
gccgtgtacaggactattggctttaaagagacagacgcgctggtctatctgactgctgtc
ccgatcactgccaagatcctagatgtggaacgcttcactagggccccggaccgcttcagc
gtgtccaaacacaggggcgtgtctaaggcaatgccagccgtgtttaagatagagctcaaa
catgggaatttcacatggatagtcaagaggaaagaaaagcactttatggagctgcacaga
gagcttctgcgatataagacgctcatgaggatcccactgcccacacgaagccacacagag
agaagaaagagcataaagaggagcgaggtgaggcagatgccggcactgcctcggggaggt
ggagatgagttggcacgagaggagcaagtgtctagtcggaaaaaacaactggaagactat
ctgaacaagctgctaaggatggcgatgtaccgaaaatactacgcaaccatggagtttatt
gatgtgagccagttgtccttcattcaggacttgggccctaaaggcttagaaggcattgtt
tataaaaggtcaggaggtcaccgtatccctggcatgaactgctgtggccacaatgaagtc
tgctaccgctggtccaagaggtggcttgttgtgaaggactcttttctgctgtacatgaag
ccagacacaggtgccatttcatttgtcctgctggtggacaatgagttcagcatcaaaatg
gactctaaatacacagataccaagcatggagtgaagatagagaacttgtccaggaaacta
gtgctgaaattcactagtttcagacatgcacggtggtggggtcaggccattgaaagcttt
gtccggaaacatggcaaggcctttttaagaacgcaccgctttggatcttttgccagggag
gaggagaacataccctctaaatggtatgtgaatggcaaaacctacatggaggatgtcgct
aatgcgctggaggaggccaaagaggagatcttcatcacagactggtggctgagccctgag
atcttcctgaagaggcctgtagtagaaggcaatcgctggaggctcgactgcattttgaaa
cgtaaagctcaacaaggagtgaggatctttgttatgctgtataaagaagtggagttggca
ctcgggatcaacagtgaatacagcaaaagaacactaatgcatcttcacccaaatatcaag
gtgatgaggcaccctgatcacgtgtcctccactgtctacttatgggcacaccacgagaag
attgtagtcatcgaccaatcagttgctttcgttggaggaattgaccttgcgtatggccgc
tgggatgaccgtgagcaccgactgacagatgtgggaagtgtaacacgttctgttgctcag
gccatggagcagactcaggaactggatacatccacacccaggaaaaaaggatccactggt
ggaaacagcagccggtcgatggttggtgactcagtggacctgcccaaactaaaaggcatt
ggccgtactcgcaaaacacgttttagtctgtaccatcacatccaacgtggccttcaccat
gctgacagcatcagcagcatcgacagcaccaataagagtggctcagtgcacagtcttcaa
acaggagtgggagagctaatgggaaacacacgtttttggcacggcaaagactactgcaac
tttgtctacaaagactgggttcagctggacaagccttttgatgattttattgacaggtac
acaacccccagaatgccctggcatgacatctcctcagtggtgcatgggaaagcagccaga
gatgtggccaggcactttatacagcgctggaacttcaccaaaataatgaagccaaagtac
agatcactctcctacccatttctcctacccaaatctcacaccacagccaatgatataaaa
taccaagtgccagactgtgtccataccaaagttcaggttctgcggtcagctgcagactgg
tcggcgggaaccaagcaccatgaggagtccattcataatgcctatattcaggtcattgcc
aagagcaagcacttcatctacattgagaaccagttcttcatcagttgtgccgataacaaa
catgtttacaacaagattggtgatgccattattgagcgaatcatccgagctcacaaggag
aagaaggtgtttcgtgtgtatgtggtgactcccctgctgcctggattcgagggagacatt
accacaggaggaggaaatgcacttcaggcggttatgcatttcaacctcaggaccatgaac
agaggagactactccataatcgctcagctgaagaaagaaatggatgaccaatggatgaac
tacatctctatttgtggtctaaggactcatgcggagctggagggccgactggtgactgag
ctcatctatgttcatagcaagttgctcattgctgatgacaacactgtcattattggctct
gccaacatcaacgaccgcagcatgctggggaagagggacagcgaggtagctgtgatttat
gaagattcagaaacaacaccgtctgtgatggatggtcaagagtaccaggctggcaagttt
gctctgcagctcagactggagtgtttcaaaaccattcttggtgcctttactgatccaacc
attgatgtcagggaccctatcagcaacgcattctacaaggacgtctggatgagtgtttcg
ggtcggaacgccaccatctatgagaaggttttccgctgtctgccctcaagtctggtgaga
aacaaacaggagctcatgagtttccagttcaaaccaggtcttgataaagaggaccctgtt
aaagctcaggagctgctgaagaagatcagaggcttcctggtccagttcccactggagttc
ctctgtgaggagaacctcatgccctcagtaggcaccaaagaagccatggtgcccactgag
atctggacctga
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