KEGG   Garra rufa (doctor fish): 141343937
Entry
141343937         CDS       T11039                                 
Symbol
lamc2
Name
(RefSeq) laminin subunit gamma-2
  KO
K06246  laminin, gamma 2
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04382  Cornified envelope formation
grf04510  Focal adhesion
grf04512  ECM-receptor interaction
grf04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:grf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    141343937 (lamc2)
   04518 Integrin signaling
    141343937 (lamc2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    141343937 (lamc2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    141343937 (lamc2)
SSDB
Motif
Pfam: Laminin_B EGF_laminin EGF_LMN_ATRN JAG1-like_EGF2 DUF383 Med9
Other DBs
NCBI-GeneID: 141343937
NCBI-ProteinID: XP_073704726
LinkDB
Position
10:18671742..18688104
AA seq 1141 aa
MWKMKISWIFLCAVCIWSPVHGTVRSSTTCSCHGKAQYCRADHLGLYCIDCQGNTEGRHC
ESCKEGYFHQRAGDNCAPCNCNTAGSQGLVCNNEGQCACKQGVYGEKCDRCQDGSLVTAS
GCQPLRVSCRSRISGRLTYNTEECLPCFCNGHSSVCSSAEGYSIYNITSTFENGPEGWKA
ATAQGVNPSQVQFRWSPTHKDLEVISKEILPVYLFAPASYLGNQALSYGQTLSFSLRLDR
GVRRPSTSDVILEGAGLRVSASLGDLRTVVSCGKKITYTFKLDEQPGSKWKPQLSSTEFQ
KLLSNLTAIKIRGTFGENGRGYLDDVSLVSASLGSGTPAVWVEKCSCPAGYDGLFCERCA
TGYRRRFPGQGPESPCVPCSCQGGTCDPETGGCYSADEIPSLQMCPKGYYVNRQQSNSCQ
RCPCPEGEACYVIPGTQEVMCVRCPRGTTGSRCEICDDGFYGDPLGEYGPPKQCQPCQCY
GHMDQNAVGNCDRRTGDCRKCLDHSTGPSCENCEDGYYHSYPTEPCQACNCNRQGSVSNS
CNNKGQCKCKEGYDGLKCDKSTCPSCFNPVKNKIEVYARQLQEMEDVFKGIGGDDAPVNG
AQMERAIRAAEVMVQNLEFRANELTNSEKQLQDKLASISRSQLREDRKMEALLTTVDGIK
NKDQQYRTEVSEIRQLISDIRLKLQQAKRDIQQAEFPSGDAVPGADTLSDLVQTAADLAE
QHQGEAVTVETIAANSLAESEKAVDLIRGVISRENKVKDELRNLKKQYEADVTKVLGMDS
KAIQLTDAAGKESGVALNALKQLSDLEKKLPKPLKKDIANVVSKFDGLKGMVEGNLSQYQ
DFQQYMLNEQKETTDLFNKAKGFQQVQDKLLARANAAEAIKNKSLEIFANNKDSLDKTLE
TLKGFDDQLSGNKDLADAAIRKLPAINATIQNAIADNLQTQDILDAMSTHYRDAQDTIDT
LTSTATKLEGMTDALPPSLDILEAATKLKEDVDGLKTGASVTKDKLNEEKNKAKAQLTQA
NNAIIESAGALENANNAREAVSDTLKSITDIMSSLGGTVPGTVDDTRLAELEDAVTKSRS
RVEKELRPRLRDLEEKEAQQRATIAGMINDIDTILADIANLEEIRKSIPNGCYNIPPIER
P
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgtggaaaatgaagatcagttggatctttctttgcgcggtttgcatctggtctccagtt
cacggaacagtccgatcctccactacctgttcatgtcatggtaaggcacagtactgcaga
gcagatcatctgggactctactgtatagactgccagggaaacacagaagggcgtcactgt
gaaagctgtaaggaaggatacttccaccagagggcaggagacaactgtgcgccctgcaac
tgcaacactgcaggttctcaaggactggtctgcaacaatgagggacagtgtgcctgcaaa
caaggagtttatggagaaaagtgtgaccgctgtcaggatggctctctagtaactgccagt
ggatgtcagcctttgagggtaagctgtcggtcacgtatcagtggccgtctcacatataat
acagaggagtgtctgccctgcttttgcaatggccattcaagcgtgtgctcctcagctgag
ggatattccatttacaacatcacttcgacttttgaaaatggacctgagggctggaaagcc
gcaactgctcaaggtgtgaacccttcgcaagtgcaattcaggtggtcgcccactcacaaa
gaccttgaggtcatctctaaagagatccttcctgtttatctgtttgctcctgcatcttat
ctggggaatcaggcattgagctacggtcagacgctcagcttctctctgcgtctggacaga
ggtgtccgtcgtccttccacctctgatgttatcctagaaggagcaggtcttagagtgtct
gcttcgctaggagacctgaggactgtggtttcctgtggcaagaaaatcacctacacattt
aaactggatgaacagcctggcagcaaatggaaaccacagctctcatcgacagaatttcaa
aaacttctgagcaaccttaccgccattaaaatcagaggaacatttggtgaaaatggacgt
ggttatctggatgatgtctctctggtgtcagctagcctgggttccgggacacctgctgtc
tgggtagaaaagtgctcatgccctgctggttatgatggactgttttgtgaacgctgtgcc
actggatacaggagacgtttccctggtcaaggccccgaaagcccctgtgttccctgctcc
tgtcagggtggaacatgtgatccagaaacaggaggttgttactcggctgatgagatacca
agtctgcagatgtgccctaaaggttattatgtcaaccgccaacagtccaactcctgccag
aggtgtccttgtcccgagggtgaggcttgctatgttattccaggaacccaggaggtgatg
tgcgttcgctgtccccggggaactacaggctctcgttgtgaaatctgtgatgacggtttc
tacggagaccctctgggagagtacggcccccccaaacagtgtcagccttgccaatgttat
ggccacatggaccagaacgctgtcggcaactgtgaccgtcggacaggggattgtcgtaag
tgcctggatcacagcaccggccccagttgtgagaactgtgaagatggatactaccacagt
taccccacagagccatgtcaggcttgtaactgcaaccggcagggttctgtgtcaaattca
tgcaacaataaaggacagtgcaagtgtaaggagggttatgacggactcaagtgtgacaaa
tcaacatgtccttcctgctttaacccagtcaagaacaagatagaggtttatgcaaggcag
ctgcaagaaatggaggatgtatttaaaggaattggaggtgatgatgctccagtcaacggt
gctcagatggaacgggctattagggccgcagaggtcatggtgcaaaacctggaatttaga
gcaaatgaactcacaaattcagagaaacagcttcaagataaactagcgagcattagccga
tcccaactgagagaggacagaaaaatggaggctttgttgacaacagtcgatgggatcaaa
aacaaggatcaacagtacagaacggaagtttcagaaatccgtcaactcatcagtgacatc
aggttaaaactgcaacaggccaaacgggacatccaacaggccgagtttccctcaggtgat
gcggtgccaggcgctgacaccttgtctgatttggttcagacagctgctgatcttgctgag
caacaccaaggtgaggcagtgacagtggagaccattgcagccaattctctagcagaatct
gagaaagccgtagatctcattcgtggtgtcatcagccgagaaaacaaggtcaaagatgag
ctcaggaacctcaaaaaacagtatgaagcagacgtaactaaagtgcttggcatggatagc
aaggctattcaactgactgatgcagctggaaaggagagtggagtggctctgaatgctctc
aaacagttatctgacctggagaagaaacttccaaagcccctgaagaaggacattgctaat
gtggtttccaagttcgatggtctgaagggtatggtggaggggaatttatcacagtaccag
gactttcagcaatatatgctcaatgagcagaaagagacgactgatctgttcaataaggcc
aaaggtttccaacaggttcaagacaaacttcttgccagggcaaatgcagctgaagcaatt
aaaaataaatctctggaaatctttgccaacaacaaggatagcctggataagacactagag
acgctcaaaggatttgatgaccagctcagtggtaataaggatctggcagatgccgctatt
agaaagcttcctgctatcaacgccaccatccagaatgccatagctgacaaccttcagact
caagacattcttgatgcaatgtctactcactacagagatgctcaggatactattgacaca
cttacaagcactgcaaccaaactggagggaatgacagatgctcttccgccctctttggat
attttggaagctgccactaaactgaaagaggacgtggatggactgaagacaggggcatct
gtaactaaagacaaactgaatgaagagaaaaacaaggccaaagcacagttaactcaagca
aacaatgccatcatagagtccgctggggcacttgaaaatgcaaataatgccagggaagct
gttagcgatactttgaagtcaatcactgatattatgagctccctgggagggacagttcct
gggacagttgacgacacacgactggctgagcttgaggatgccgtcactaaaagccgcagc
cgtgtggagaaggagctgaggcccagactcagggacctggaggagaaggaagctcagcag
agagccaccattgcaggcatgatcaatgacattgacaccatcctggctgacattgccaac
ttagaggagatccgtaaaagcatccctaatggctgttacaacataccacctattgaaagg
ccgtaa

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