Garra rufa (doctor fish): 141343951
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Entry
141343951 CDS
T11039
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141343951 (kcnn1a)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
141343951 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DUF6775
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
141343951
NCBI-ProteinID:
XP_073704752
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Position
10:27691047..27734579
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AA seq
898 aa
AA seq
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MRHRHAGAVHQQHSNDTDARDSQKEASRPVAPLFSLPPPPPSIKERSTSSHQSRHVQSCP
ERRGTRNGECLLPLTGHCSLPHSDRQPYDNQPQPFPGASSAYQCHFEGLSQSSHSPQHKS
SVSPQPSPSDLLPPPLPSHISNTRDTRQKSANYKQDIVQRRVGEGGRRDQNQLLQQPCYN
QQRDPSFELLLPNSAQGQINAREEAEKDRQLIEPQAQLLLGSSLPVNYCIDGSGQVCRNK
QAPLLQHQQQAGAQEHSLQRQQSDQDGNSSNSSRYQEGKIALYQPYRCERALERNSSVSS
SETSSPPYGSSSQLWPEPHDKEDRKNRAGKHKAHAERTKLSHAGSKPSLSESSHSLPQIA
MNSCKYNGGVVRPLGSLAASRRNLAEHDSETQPLQTLHSSGLEVVVSKGGGEDPSKASNE
SLVRESGNAPQKKNKDIGYKLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVY
TKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLE
LLVCAIHPIPGQYVFTWTARLAFTYVPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLF
TDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQE
VTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELT
KAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIH
QLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDAVTGS
LQALPCLISQAISQQQQDLLDGFVHRFCPASLGSERSWTPSRRRRSPSTAPHTSSDSG
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggcacgcgggagctgtccaccagcagcacagcaacgacacggacgctcgt
gacagtcagaaggaagcatctcgtccagtcgccccgctctttagtctgccgcccccaccg
ccatcgataaaggagcgatccacctcctcacatcagagccgacatgtacagtcttgtccg
gagcgccgcggcaccaggaacggcgagtgcctgctgcctttgaccggccactgcagcctc
ccgcacagcgaccgtcagccttacgacaaccagccgcagccgtttccaggggcctcatct
gcctatcagtgtcattttgaggggctctcgcagagcagccattctcctcagcacaaatct
tccgtttccccgcagccctccccatctgatctgctgccgccgcctctgccttcgcacatt
tctaatacgcgggatacgcgccaaaagagtgctaattacaaacaagacatcgtacagcgt
cgcgtcggggagggggggcgtcgagaccaaaaccagttgctgcagcaaccttgttataat
caacaaagagacccctcctttgagctactcttgccaaactctgctcaaggacagataaat
gcacgcgaggaagccgaaaaggacaggcaattgattgagcctcaggctcagttactgctg
ggcagcagcttgcccgtcaactactgcatcgacggatcggggcaagtgtgcagaaacaag
caggcgccgctgttgcagcatcagcagcaggctggcgcgcaggaacacagcctccagcgg
cagcagagtgaccaagacggcaacagcagcaacagcagcaggtaccaggaggggaaaatc
gcgctctatcagccgtatcgatgcgagcgagcgctagagagaaactcgtcggtttctagt
agtgaaaccagcagccccccgtacggctccagcagtcaactgtggccagagccccacgac
aaggaggacaggaaaaatcgcgcaggcaaacacaaggcacatgctgagcgaacaaagctg
agccatgctggatccaagccctccctctccgagagcagtcactcactccctcagatagcc
atgaacagctgcaagtacaatggaggagtggtaagaccactgggcagcctggcggcgtca
cgacgcaacctagcagagcatgactctgagacccagccgctccagactcttcacagctcc
ggcctggaagtggtcgtctccaagggcggtggcgaggaccccagcaaggcgtccaatgag
agcctggtccgagagagtggcaacgcaccacagaaaaaaaataaagatattggctacaag
ttgggccacaggagggcactttttgagaagcgcaagcggcttagtgactatgccctgata
ttcggtatgtttgggatcgttgtcatggtaacagagactgaactgtcctggggggtttac
actaaggaatcttcatattcatttgcactgaaatgccttatcagcctttccactgttatt
ttgcttggtcttataataatgtaccacgctcgggaaatacagctgttcatggtggacaat
ggggcggatgactggaggatagccatgacgtatgagcgcatcttcttcattgtcctggag
ctgctggtgtgtgccattcacccgatcccgggccagtacgtgttcacgtggacggcccgg
ctggctttcacctacgtgccctccgtggccgacgccgacgtagacatcatcctctccatc
cccatgttcctccgcctctacctgattggccgggtcatgctccttcatagcaagctcttc
accgacgcatcgtcacgcagtataggtgccctcaacaagatcaacttcaacacgcgcttc
gtgatgaagaccctcatgaccatctgcccgggcaccgtgctgctggtcttcagcatctcc
tcctggatcatcgcggcctggacggttcgggtctgtgagaggtatcatgacaaacaggaa
gtcactagtaactttcttggagctatgtggctaatttccataactttcctatcaattggc
tatggagatatggttcctcatacatactgtgggaaaggggtttgtctgctcacaggaatc
atgggcgctggttgcactgcacttgtagtcgcggtggtagccagaaagttagaattgaca
aaagctgagaaacacgtccacaatttcatgatggacacccaactttgtaaacgagtaaag
aacacagctgccaatgtactcagggaaacatggctcatctacaaacacacaaagttagtg
aagaagatagatcatgccaaagtgcgcaaacatcagcgcaagttcttgcaggccattcac
cagctccgcagtgtgaagatggagcagaggaaactcaatgaccaggccaacactctggtg
gacttggcgaagactcagaatgtgatgtacgacctggtgtcggagctgcaggaacgcagt
gaggagctggacaagcgtattggcacgttggaggacaagctggacgcagtcaccggcagc
ctgcaggctctgccctgtctgatctcccaagccataagtcagcagcagcaggacctcctg
gatggctttgtgcaccgcttctgccccgcttcgctgggctcagagcgctcctggactccc
tccagacggcggcgctcgccctccactgccccgcacacttcctccgacagcggctaa
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