Garra rufa (doctor fish): 141344012
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Entry
141344012 CDS
T11039
Symbol
pls1
Name
(RefSeq) plastin-1
KO
K17275
plastin-1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141344012 (pls1)
04147 Exosome [BR:
grf04147
]
141344012 (pls1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141344012 (pls1)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of microglial cells
141344012 (pls1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
CAMSAP_CH
DUF7460
DUF5580
Motif
Other DBs
NCBI-GeneID:
141344012
NCBI-ProteinID:
XP_073704830
LinkDB
All DBs
Position
10:40918951..40944196
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AA seq
629 aa
AA seq
DB search
MENKVTQISREDLEDLREAFNKVDIDNSGYVSDFELQELFREARFHLPGYKIREIVEKFM
GGDTNKDEKISFEEFVAMYQELRSKEVRESFRKCISRRDGIRSFGGTSRISSEGTQHSYS
DEEKVAFVNWVNKALADDPDCKHLIPMDPDTDSLFKSVKDGILLCKMINLSQPDTIDERV
INTKKCTPFTMTENLVLALNSASAIGCTVVNIDAQDMKAGTPHLVLGLLWQIIKIGLFAD
IEISRNEALIALLGESEDLDHLMSMSPEDLLLRWVNYHLKAAGCQPIGNFSDDIKDSRAY
FHLLNQISPKGDGDDEMRIDIDMTGFNERDDERRAELMLKQADRLDCRQFVTPKDVVAGN
HKLNMAFVANLFNMYPALTRVASNGIDYAIEGETREDRTFRNWMNSLGVSPHVNHLYSDL
QDALIILQLYERIQVHVDWTRVNRPPYPALGSNMKKLENCNYAVALGKKEAKFSLVGIGG
ENINEGSPMHTLALVWQLMRRYTVKVLSDIGDGEKVSDQIIVNWVNDTLKQGQKNSYISS
FKDKSISTSLPVIDLIDTIMPKAIKHEMVKRGDLTPEDKLNNAKYAISVARKIGVRVYAL
PDDLVEVNPKMVMTVFACLMGRSLKKVDG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaacaaagtaacgcagatctccagagaagatctggaggacctgagagaggctttc
aacaaagttgatattgataacagcggctatgtaagcgattttgaacttcaagagcttttt
cgagaagcccgctttcaccttcctggatacaagatacgggagattgtggagaagttcatg
ggaggtgacaccaacaaagacgaaaagatcagttttgaagagtttgttgcgatgtaccaa
gagctaagaagcaaagaggtgagagaatccttccgcaagtgcatctccaggcgggatggg
attcgttcgtttggaggaacatcaaggatctcaagtgaaggaactcagcattcttactca
gatgaagaaaaagtggcctttgtgaactgggtcaataaggccttggcagatgatcctgac
tgcaagcatctgatcccgatggacccggatactgacagtttattcaaatctgtgaaagat
ggaatattgctgtgcaaaatgatcaacctttcacagccagacaccattgatgagagggtc
atcaacacaaagaaatgcactccatttacaatgacggagaatttggtgttggctctgaac
tctgcgtcggctattggctgcacggtggtcaacatcgacgctcaggacatgaaagcagga
acgcctcaccttgttcttggcctcctttggcaaatcataaaaatcggcctcttcgctgac
attgagatctcacgcaatgaagctctaattgctttgctgggagagtcagaggacctggac
cacctgatgtcaatgtccccagaggaccttttgctgcgatgggtcaactatcacctcaaa
gctgctggctgccaaccaattggaaacttcagtgacgatattaaggactccagggcatat
tttcacctgcttaatcagatctcgcctaaaggagacggggatgacgagatgaggattgac
attgacatgactggtttcaatgagcgtgatgatgaaaggcgagcagagctgatgctgaag
caggcggatcgtctggactgcagacagtttgtcactcccaaggatgtggtggcaggaaac
cataaactcaacatggcctttgtagccaatcttttcaacatgtacccggccttgacccga
gtcgccagcaatggcattgattatgcgatcgagggggaaacaagagaggacaggacattc
aggaactggatgaattctctgggagtttctccacatgtcaatcacctgtacagtgatctg
caagatgctctcatcattcttcagctgtatgagagaatccaggttcatgttgactggact
agagtcaacagacctccctatccagcactgggatccaatatgaagaagcttgagaattgt
aattatgcggtcgcactgggcaaaaaggaagcaaagttttccttagtaggaatcggtggg
gagaatatcaatgaaggaagccccatgcacacccttgcactggtctggcaactaatgaga
aggtacacagtgaaggttctgtctgacatcggtgatggggaaaaagtcagtgaccaaatt
attgtcaactgggtgaacgacaccttgaaacaaggccagaaaaattcctacattagcagc
ttcaaggataaatcaatcagcactagcctgccagtgattgatctgatcgacaccatcatg
cccaaagccatcaaacacgagatggttaagcgaggagacctgacgccagaggacaagcta
aacaatgcaaaatatgcaatctcagtggcgcgaaaaatcggagtcagggtgtacgccctg
cctgatgaccttgtggaggtcaaccctaagatggtgatgacggtgtttgcatgccttatg
ggaagaagcttgaagaaagtagacggctga
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