Garra rufa (doctor fish): 141344046
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Entry
141344046 CDS
T11039
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a
KO
K26273
protein strawberry notch
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141344046 (sbno2a)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
141344046 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
141344046
NCBI-ProteinID:
XP_073704871
LinkDB
All DBs
Position
10:3442706..3488030
Genome browser
AA seq
1569 aa
AA seq
DB search
MPTLAKSVVMDTEDFLHPEGPQLGSPKFSAPSPPLTSSMESQLYPSNSWTYPQQTQYNQH
YPMQSGRQLQPNPSSVNLDLSDMDFQDLVQNGDFSQDLCIDELSNTSLFSSPSDSLSEYP
DPSGFGPDSLAQLPAEGPAPQMYWDIPGHSQRQQNLSAFPGRLDDFSAILSASVAGFKAA
AAPPPLLPPVEEEEEADEEETEELGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPPP
DITYTLSIPDSAINSGLLSALQLEAIVYACQQHEVILQNGQRAGFLIGDGAGVGKGRTVA
GIILENFLKGRKKALWFSVSNDLKYDAERDLKDIDAPNIPVFALNKIKYGDTATSEGVLF
ATYSALIGESQAGGQHRTRLKQILDWCKPNFDGVIVFDECHKAKNATSTKMGKAVLDLQS
KLPRARVVYASATGASEPKNMIYMSRLGIWGQGTPFKAFDDFLHAIEKRGVGAMEIVAMD
MKVSGMYIARQLSFSGVSFRIEEITLDEEFKLVYNKAARLWAEALELFTRAADTLGLASR
KSLWGQFWSSHQRFFKYLCIAAKVRRLVELAHTEMQHGKCIVIGLQSTGEARTREVLDEN
DGHLDRFVSAAEGVFQSLVQKHFPTQKPKREKSAASKRKRKPKGRPSKFPKHCVEVGGVI
KISDDSDSDSDEIDSVSNSSPESLQDNDDVIFVNHINGPAAKLEELKQRLLCKIAELGKE
LPLNTLDELIDRFGGPEKVSEMTGRKGRVVRRDGSVRYETRAEQGLTIDHVNVREKERFM
TGEKLIAIISEAASSGISIQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHRSNQVTA
PEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKI
TKAILGHIDNKVPPPKGYPGGPIMFFRDMKKGMIDVGIFCKEPRLGLNTEKDCTITKFLN
RILGLEVHQQNSLFQYFTDNFDYLINKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPG
NPQEGQVILYKISVDRGMPWEEACSKAEKLTGDYEGFYLSNKLRGSQPCVLLAEQGRGRN
LILYKPNIGKQAHPENLDNLLLRYYKVTPDEAKDLWETQFVFSFTNCTHANWKGNCKMIE
QGQECFLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIP
ENCVSRVRAELSRMDEEVKKARREREQVANDQRLRQEMLAKMLNARKLMANPSHSLQNRL
HYQRSLLPPVAKPKSEAINEVLDLTISPCPSPDIKTPAPDLNGMRGRPCPTVPETFNLED
LISQEQQRHRQVALNPNVRMSATHIPQQHIHTLKQNHSSFGVLTQQQQQQSVSRAQPSAQ
YSTLLSQLHRGQDTSLMLRLLTQMQQQTGVSAQSQRTSNAHLFSSHAQLSKQHAQPSQPL
AVQSHVPQPATERTNDEFDFDDLDFSYHSPDSQLQHPFSTQALPSLTPPPPPYSSSLFAS
APTSSSLSDSSSSSSHFTPSSSSSEQTHLLPNGHGNMDALETLDHMIHGTPSDHRQSVIQ
FKTMDWDAT
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgcccactcttgccaagtctgttgtcatggacacggaggactttctgcaccctgagggc
cctcagttggggagcccaaagttcagcgctcccagtcctcctctcacaagttccatggag
agtcagctgtatccgtctaactcatggacgtacccacagcaaactcaatacaaccagcac
tatcctatgcaatctgggaggcagctccagccgaacccgtcgtctgtgaacctggacctg
tctgacatggactttcaagaccttgtgcagaatggcgatttctcccaggacctttgcata
gacgagctgtccaacacatcgctgttctcttcgccatctgattctctgtcggagtaccca
gacccttcaggatttggcccggatagcctggcacagttacccgctgaaggccctgcgcca
caaatgtactgggacatacctggacacagtcagagacagcagaacctgagtgcatttcct
ggtaggttggatgacttcagtgctatcctgtctgcgtcggtcgcaggatttaaggctgct
gctgctcctccgccgctgctgccgccagtggaggaagaggaggaggcagatgaggaagag
acggaggagttggggcatgcggacacatacgccgaatacaagccatcaaaatctaccata
ggaatctctcatcctgacatcgtggtggagaccaacacactgtccagcgttcctccgcct
gacatcacctacacactgtccattccagacagcgccattaactccggcctgctgtccgcc
ctgcagctagaggccatcgtctacgcttgccagcaacacgaggtgattctgcagaacggc
cagcgagcggggtttctgatcggagacggagccggcgtcgggaagggccgcactgtggcc
ggaatcatactggagaatttcttaaagggacggaagaaagcgctatggttcagtgtgtca
aatgacctgaagtacgatgctgagagagatctcaaagatatagatgctcccaacatcccc
gtgtttgctttaaataagattaaatacggagatacggctacctcagagggcgttttattc
gccacatactcagcgctgattggagaaagccaggccggagggcagcaccgcaccagactc
aaacagattctggactggtgcaaacccaactttgatggagttattgtgtttgatgagtgc
cataaggctaaaaatgcaacctccaccaagatgggtaaagccgtcctggacttgcagagc
aaactgccccgggcgagagtggtgtatgctagtgccacaggtgcttctgagccaaagaat
atgatatacatgagccgactggggatctggggacaaggaacgccgttcaaggcgtttgac
gacttcctgcatgctattgagaaaaggggtgttggtgctatggaaattgtcgccatggac
atgaaagtgagtggcatgtatatcgcacggcagctgagcttttccggcgtctcctttcgc
atagaggagataacactggacgaagagttcaaacttgtctacaacaaagcagctagactg
tgggctgaggctctcgagttattcaccagagccgcagatacgttgggtctggcctcccgt
aagtctctttggggtcagttctggtcgtcacaccagaggttttttaagtacctctgtatc
gctgctaaagtccgtcgcctggttgaactcgctcatactgagatgcagcacggcaagtgc
atcgtgattggcctgcagtccacaggagaggctcgtactcgagaggtcctggatgagaac
gacggtcacctggacagattcgtctccgctgctgagggtgttttccagtcattagttcag
aaacacttcccaacacagaaacccaaaagagagaaaagcgccgcaagcaaaaggaaacga
aaacccaaaggccggccttcaaaattcccgaagcactgtgtggaagtgggcggagttatt
aaaatcagcgacgactcggattccgactctgacgagattgacagcgtctctaactcctcc
cccgagtcactacaggacaacgacgatgtgatttttgtgaaccacatcaacggacctgct
gctaaactagaagagctcaagcagaggctgctgtgtaaaatagcagagttggggaaggag
ctgccgctcaacactctcgatgagctgatcgacaggtttggaggaccagagaaggtgtct
gagatgacgggtcgtaagggacgtgtagtgcggcgtgatggcagtgttcgatatgagacc
agagcagaacagggcctgaccatcgaccacgtcaacgtcagagagaaagagcgcttcatg
accggagagaagctgatcgccatcatctctgaagcggcgagttcgggcatctctatacag
gcggataaacgtgtgcagaaccgcaggagacgagttcacatgaccttagagttgccgtgg
agcgccgaccgcgccattcagcagttcggtcgaacgcatcggtcaaatcaggttacggct
ccagagtatatcttcctcatctctgagctggctggagagagacgcttcgcctctatcgtt
gccaagagattggagagcctgggggcactgacacatggggatcgacgagccactgaatcc
agagacctgagccagtacaacttcgagaacaaatacggcaccaaagctttggataagatc
actaaagccatcctcgggcacatcgacaacaaagtccctccaccaaagggctacccagga
ggacccatcatgttcttcagagatatgaagaaaggcatgattgatgtgggaatcttttgc
aaggagcctcgtctaggtctgaatacagagaaagactgcaccatcactaagtttctgaac
cgtattttgggtttggaagtccatcagcagaactctctgttccagtacttcaccgataac
ttcgactacttgatcaacaaggacaagaaagagggaaaatatgacatgggaatattggat
cttgctcctggtaatgatgaaattcatgaggaaacgcaagagaagtttctaactccagga
aaccctcaggagggccaggtcatcctctataagatcagtgtggatcgtgggatgccctgg
gaagaggcctgcagtaaagcagaaaaactcactggagactatgaaggcttttacctctca
aacaagctgcgtgggagtcagccgtgcgtcctgcttgctgaacaaggtcggggtcgcaat
ctcatcctgtataagcccaacatcggtaaacaggctcatcctgagaacctggacaacctg
ctgctgagatactacaaggtgacacctgatgaagcgaaggatttatgggagactcagttt
gtcttttctttcaccaactgcacacatgccaactggaagggtaattgtaagatgatcgaa
cagggccaggagtgttttctggggatgcgtctcaggcagtatcacatgttgtgcggagcg
ctgctgagggtttggaaacgagtgtctgacatcgtctcggacatcaccaactccagcatc
ctgcagatcgtacggctcaaaaccaaacagaacagcaagcaagttggtataaaaatccca
gagaactgcgtatcccgtgtgcgcgccgagctctctcggatggatgaagaggtgaagaaa
gcccgccgagagagagagcaagtcgcaaacgaccagcgcctgcgccaagagatgctggcc
aagatgctcaatgcccgcaagctcatggcaaacccttcccactcccttcagaaccgtctt
cactaccaacgatcccttttaccccctgtggcaaagccgaagagcgaagccatcaacgag
gtcttggatctaaccatcagcccctgcccatcgccggacatcaaaacgccagcgccagac
ctaaacggcatgagaggacggccgtgcccgaccgttcccgagacgttcaacctggaagat
ttgatctcccaggagcagcaaagacacagacaggtggcgttgaacccgaacgtgcgcatg
tcggcgacacacatcccacagcagcacattcacacactaaagcaaaatcattcgtcgttc
ggggtgctgacgcaacagcagcagcaacagagcgtctcacgcgcgcaaccgtctgcgcag
tacagcacgcttctctcgcagctgcatcgagggcaagacacgtcgctcatgctgcggctt
ctcacacagatgcaacagcaaaccggcgtgtcggcgcaatcccagcgcacatctaacgca
cacttgtttagctcacacgcacagctatcgaagcaacatgcgcagccgtcgcaaccccta
gccgtgcagtcgcacgtccctcagcctgctacagaaagaacaaacgacgagttcgatttc
gacgacttagacttcagttaccactcgcccgattcgcaacttcagcacccgttctccaca
caagccctgccatccttgactccgccccctcctccttactcctcctccctctttgcttcg
gcgccgacaagctcctccctctcagactctagctcctcctcctcccacttcacgccttcg
tcctcttcctccgaacagacgcatctgttaccgaacggccacggcaatatggacgccctg
gagacgctagatcacatgatccacgggacgccctcggatcaccggcagtccgtcatccag
ttcaaaacgatggactgggacgccacctag
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