Garra rufa (doctor fish): 141344082
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Entry
141344082 CDS
T11039
Symbol
abcf2a
Name
(RefSeq) ATP-binding cassette sub-family F member 2a
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
grf03009
]
141344082 (abcf2a)
Ribosome biogenesis [BR:
grf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
141344082 (abcf2a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
MMR_HSR1
AAA_28
AAA_22
RsgA_GTPase
AAA_24
AAA_16
AAA_33
VapE-like_dom
AAA_30
NACHT
AAA_23
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
141344082
NCBI-ProteinID:
XP_073704922
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All DBs
Position
10:21486081..21494984
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AA seq
613 aa
AA seq
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MPSDLAKKKAAKKKEAAKARQRTKKPEDGVNGDAEKPEIQQNGAAEVDEVASLTKELDEF
ELKKTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLSDTSLELNSGRRYGLIGLNGTG
KSMLLSAIGHREVPIPEHIDIYHLTREMAPSEKTALQCVMEVDEERIKLEREAERLAHED
SNCEKLMELYERLEELDADKAEMRASRILHGLGFTTAMQQKKLKDFSGGWRMRVALARAL
FLKPFMLLLDEPTNHLDLDACVWLEEELREFRRILVLISHSQDFLNGVCTNIINLHQRKL
KYYTGNYDQYVKTREELEENQMKRFNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTL
QKMVASGLTERVVNDKTLSFYFPPCGKIPPPVIMVQNVSFRYSDNTPHIYKNLEFGIDLD
TRVALVGPNGAGKSTLLKLLTGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYM
MKCYPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEP
TNHLDIETIDALAEAINEFEGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWSKDILAYKE
HLKSKIDKQLHDL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgatttagcaaaaaagaaggctgcaaagaagaaagaagcagccaaagctcgt
cagcgtacaaagaaaccagaggatggagtgaatggggatgcagagaaacctgagatccag
caaaatggagcagctgaggtcgatgaggttgccagtttgacgaaggagctggatgagttt
gagctgaagaaaacagaggctcgggcagtgactggtgttctggcgtctcatcccaacagc
actgatgtgcatatcagcagcttgtctcttacctttcacggacaggagctgctcagtgac
actagtttggagcttaactctggccgtcgatatggccttattgggctcaatggaaccggc
aaatccatgctgctctcagcgattggtcacagggaggtgccgattccagagcacattgat
atctaccacctgacccgtgagatggctcccagtgagaagaccgctctgcagtgtgtgatg
gaggtagatgaagagaggatcaagctggagagagaggctgaaaggctcgcacatgaggat
tctaattgtgagaagctgatggagctgtatgagcggttggaggagctggacgctgataaa
gctgagatgagggcctcgcggatcctccacggtctgggcttcactactgcaatgcagcag
aagaaactcaaagacttcagcggtggctggaggatgcgtgttgctcttgcacgggcattg
tttctcaagcctttcatgttgctgttggatgagccaacaaaccaccttgacttggacgcg
tgtgtgtggctggaggaagagctcagagagttcaggagaattctggttttaatatcccac
tctcaggacttcctcaatggtgtttgtaccaacattattaacctgcaccaacgcaagctg
aaatattacacgggtaattatgaccagtatgtgaaaaccagagaggaactggaggagaat
cagatgaagcggtttaactgggagcaggaccaaatagcacacatgaagaactacattgct
cggtttggtcacggttctgccaagctggccaggcaagctcagagcaaagagaagactcta
cagaagatggttgcctcaggtcttactgagcgtgttgtaaatgacaagaccctgtcattt
tattttcctccctgtgggaagatccctcctcctgttattatggttcagaatgtcagcttc
aggtattcggataatacgccacatatttataagaacctggagtttggaattgacttggac
acaagggtggcccttgtagggcccaatggggcgggcaagtctactttgctgaagctcctc
actggagagctcctgcccacagatggtatgattagaaaacactcccatgtgaagatcgga
cgatatcatcagcatctaacagagcaattggagcttgacctttcacctctggagtacatg
atgaagtgttaccctgagattaaggagaaggaagaaatgaggaaaatcattggccgttat
ggactcactggcaaacagcaggtgagtcctattaggaatctgtctgatgggcagaagtgc
cgtgtctgctttgcctggctggcctggcagaatccccacatgctctttcttgatgagccg
accaatcaccttgacattgaaaccattgacgctctggctgaggcgatcaacgagtttgag
ggtggaatgatgctggttagccacgactttaggcttattcagcaggtggctcaggagatc
tgggtttgtgaaaagcagaccatcacaaaatggagcaaggacattctggcctacaaggaa
catctaaaatcaaaaatcgacaaacagttgcatgatttatag
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