Garra rufa (doctor fish): 141344107
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Entry
141344107 CDS
T11039
Symbol
acsl3b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00061
Fatty acid biosynthesis
grf00071
Fatty acid degradation
grf01100
Metabolic pathways
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
grf04146
Peroxisome
grf04216
Ferroptosis
grf04920
Adipocytokine signaling pathway
Module
grf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
141344107 (acsl3b)
00071 Fatty acid degradation
141344107 (acsl3b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141344107 (acsl3b)
09143 Cell growth and death
04216 Ferroptosis
141344107 (acsl3b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141344107 (acsl3b)
03320 PPAR signaling pathway
141344107 (acsl3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
grf01004
]
141344107 (acsl3b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141344107 (acsl3b)
Enzymes [BR:
grf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
141344107 (acsl3b)
Lipid biosynthesis proteins [BR:
grf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
141344107 (acsl3b)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of breast milk
141344107 (acsl3b)
Exosomal proteins of breast cancer cells
141344107 (acsl3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
141344107
NCBI-ProteinID:
XP_073704953
LinkDB
All DBs
Position
10:complement(10223854..10256036)
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AA seq
711 aa
AA seq
DB search
MKLKEDMSPLLLQVFRSVVWVYSVITFLPWYLLSGASARQAHAKRVKARTVSGNPAGPYR
AVNSQQKLGSLVHEGVDTLDKVFEYAVVHFPQRDCLGTRELLSEEDEIQPNGKVFKKVIL
GDYNWLSYEDTFHLSQRFGSGLAALGQKPLCNIAVFCETRAEWIIAAQACFMYNFPMVTL
YSTLGGAAIAHGLNETEVTHIITSKDLLQSRLKAILMDVPRLKHIIVVDMKPTSWPDLPR
GILVHNMAAVQELGAKPENIMVSRRQPVPSDIAVIMYTSGSTGIPKGVMISHSNIIAGIT
GMAERIPNLNENDTYIGYLPLAHVLELSAELVCVSHGCRIGYSSPQTLADQSSKIKKGSK
GDTSMLRPTLMAAVPEIMDRIYKNVMTKVEEMSSVQKTFFVLAYNYKMEQISKGYSTPLC
DRLVFKKVRSLLGGNMRVLLSGGAPLSAATQRFMNICFCCPVGQGYGLTETCGAGTISEL
SDYSTGRVGAPLVCSEIMLKNWEEGGYFSTDKPNPRGEIVIGGPNVTMGYYKNDKKNRED
FFVDANGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAVLKNCSLIDN
ICAYANSDESYVIGFVVPNQKQLTALAEQRGIRGPWEEICNHAEMEKEVLRIITDAAITG
KLERFEIPKKIRLSAEPWTPETGLVTDAFKLKRKELKSHYQDDIERMYGGK
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgaaggaggatatgtctcctctcctgctgcaggtctttcgatcagtcgtctgg
gtttattccgtcatcacgttccttccctggtacctgctctccggagccagcgcgcgccag
gcccatgctaaaagggtcaaagcacgcacagtaagcgggaatccggcagggccgtaccgg
gctgtgaacagccagcagaagttggggtccttggtgcatgagggcgtggatacattggat
aaagtgtttgaatacgctgtagtacactttcctcaaagagactgcctcggcactagagag
ctgctgagcgaggaggatgagatacagcctaacggcaaggtctttaagaaggtgattttg
ggcgattataactggttgtcgtatgaagacactttccatctgtcgcagaggtttggtagt
gggctggccgcactgggtcagaagcctctttgtaacatcgccgttttctgcgagactcgt
gctgaatggatcatagcggcacaggcttgcttcatgtacaacttccccatggtgactcta
tactccacattgggaggagcagctatagctcatggtctaaatgagactgaggtcacacac
atcatcaccagcaaagacctgctgcagagccgcctcaaggccattctgatggatgtcccc
agactcaagcacattatcgtggttgatatgaagcccaccagttggcctgatctccccaga
ggcatcttggtccacaacatggctgcagtgcaggaactaggggccaaacctgaaaatata
atggtgtcccgcagacagcctgtcccgtccgatatcgcagtgatcatgtacaccagcggc
tccacaggcattcctaaaggagtcatgatctctcatagcaacatcatcgccggcattacc
ggcatggccgaacgcattcctaacctgaatgagaatgacacctacattggctacctgcct
ctcgctcatgtcctggagcttagtgctgagctggtgtgtgtgtcacatggctgccggatt
ggatattcgtcacctcagactcttgctgaccagtcgtctaaaattaaaaagggcagtaaa
ggagacacaagtatgctcagaccaacactgatggcagccgtacctgagattatggaccgt
atctataagaatgtgatgactaaagttgaagagatgagcagtgtgcagaaaactttcttt
gttctggcatacaactacaagatggagcagatctccaaaggatacagcacgccactctgt
gacaggctagtgttcaagaaggttcgttcattgctgggtggtaacatgcgtgtgctgttg
tctggcggagctcctttatctgcagctactcaacggtttatgaacatctgtttctgctgt
cctgtgggacagggttatggcctcaccgaaacctgtggagctgggaccattagcgagttg
tctgattacagcactggacgtgttggagctcctctggtgtgttcagagatcatgctaaag
aactgggaggaaggtggttattttagcacagataaaccaaacccgcgaggagagattgtg
attggcggccccaacgtcaccatgggttactataaaaatgataaaaagaaccgagaggac
ttctttgtggatgcaaatggccagcgctggttctgcactggagacattggagagtttcac
cctgatggctgcctcaagattatcgatcgtaagaaggacctggtgaagttgcaagctggt
gaatatgtgtctctgggcaaagtggaggctgtgctcaaaaactgctcactcattgacaac
atctgcgcttatgccaacagtgatgagtcttatgtgattgggtttgtggtgcccaatcag
aaacagttaactgcccttgctgagcagagaggcattagaggaccatgggaagagatctgc
aaccatgcagagatggagaaagaggttctacgtatcatcacagatgcggctataactggt
aaactggagcgcttcgagatcccaaagaaaatccgcctgagcgccgaaccctggacgccc
gagacgggcctggttaccgacgccttcaaactcaaacgcaaggaactaaaatcgcactat
caggacgatatcgagaggatgtatggcggcaagtga
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