Garra rufa (doctor fish): 141344200
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Entry
141344200 CDS
T11039
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
141344200 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
grf01007
]
141344200 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141344200 (farsa)
Enzymes [BR:
grf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
141344200 (farsa)
Amino acid related enzymes [BR:
grf01007
]
Aminoacyl-tRNA synthetase
Class II (U)
141344200 (farsa)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
141344200 (farsa)
Prokaryotic type
141344200 (farsa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
HTH_11
MarR_2
tRNA-synt_2b
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
141344200
NCBI-ProteinID:
XP_073705101
LinkDB
All DBs
Position
1:complement(22507712..22516867)
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AA seq
497 aa
AA seq
DB search
MADTGLLESLLRLLEKVDGGIDSQDVAADLGVDHQVIVGAVKSLQALGEVISAEQKSSKR
WELTGEGCEIAEQGSHEARVFNAIPDEGLPQNELMKMQSGKVGFSKAMSNKWIRLDKTHE
GGPRVFKTVETIDDTVRGKLQLVLKGQSAKLEDKERNELKKRKLLSEVTVKSYWITKGSG
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEAMGVAPDSGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFISDPALAHEFPQDYLERVKKVH
SEGGYGSQGYKYDWKIEEAQKNLLRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGNLMGILHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGVFRPEMLLPMGLPEGVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaccgggcttttggaatcactcttacggctgttggagaaggtagatggcggc
attgacagccaggatgtggccgcggatctcggggtggatcatcaggtgatcgtcggtgcg
gtgaagagcctgcaggcgctgggagaggtgatctcagcagagcagaagtcctccaaacgc
tgggagctgacaggagagggatgtgagattgctgagcagggcagtcatgaagcccgagtg
ttcaacgccatccctgacgagggtctgccgcagaatgaactcatgaaaatgcagagcggg
aaggttggtttcagcaaagccatgtctaacaaatggatccgtctggataaaacacacgag
ggaggaccaagggtcttcaaaactgtggaaactattgatgatacagtaaggggaaaacta
cagctggtgctgaagggacagtcagcaaaactggaggacaaagaaaggaatgaactcaag
aaacgtaaactgctatctgaagtgacggttaaatcatactggatcactaaaggcagcggc
ttcagtaccaccatcaccaaacaagagacagaactcactccagagatgatcgccagtgga
agctggaaggagaaaaagttcaaaccatataattttgaggcaatgggtgttgctccagac
agtggtcacctgcatccgctcatgaaggttcggacgcagttcaggcagatcttcctggag
atgggattcacagaaatgcccaccaataacttcatcgaaagctccttctggaacttcgat
tctctatttcagcctcagcagcacccagctagagaccaacacgacaccttcttcatctca
gacccagcactggctcacgagtttcctcaggactatttggagagggtgaagaaggttcat
tctgaaggaggttatggatcacagggatacaaatatgactggaagattgaagaagctcag
aagaacctcctgcgaacacacaccacggcagtcagtgctcgcatgctgtataaactcgca
cagcaggagaagttcacacctgtgaagtacttttccatcgatagagttttccgtaatgaa
actctggatgcaactcatctcgcagagtttcaccagatcgagggtgtggtggccgactac
ggccttacgctgggaaacctcatgggcatcctgcaccagttctttaccaaattaggaatc
acaaaattgcgcttcaagcctgcatacaacccctacaccgagccaagtatggaggtcttc
agctatcatgaaggtctgaagaagtgggtggaagtgggtaattctggggtcttcaggcct
gaaatgctgctgcccatgggtttgcccgagggggtgtcagtcatcgcctggggtctgtcc
ttggaaagacccaccatgatcaagtatggaatcaacaacatccgagagcttgtgggccac
aaagtgaatctacagatggtgtacgacagcccaatatgtcgactggactcttaa
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