Garra rufa (doctor fish): 141344260
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Entry
141344260 CDS
T11039
Name
(RefSeq) guanylate-binding protein 2-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141344260
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Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF4830
NuDC
DUF2853
Motif
Other DBs
NCBI-GeneID:
141344260
NCBI-ProteinID:
XP_073705193
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Position
10:complement(13697350..13706038)
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AA seq
625 aa
AA seq
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MACGGLMSAPVCLIENDENGKLRVRKEAKDILDGINQPVVVVSVVGLYRSGKSYLMNRLA
GQQSGFALGSTIESKTKGIWMWCVPHPKKEGHTLVLLDTEGLGDVKKGDEKHDTWIFCLA
VLLSSTLVYNSLGVIDNTALEKLHYVTELTENIRVKAEVGQHENESADFMRVFPTFVWAV
RDFTLQLIKEDKAITSDDYLEGALELKQGSSPQSEQYNLPRRCLRNFFAVRKCFVFPRPA
NTEDMWRMEQLTENELDSKFLEQANTFCSYIYNNSETKTVSGGRTIIGTALGNLAEVYVE
AIRTGKVPCLENAVVSLAKIQNVRAVEEALQIYMTELFNLIHLPINPAKLSIIHSATEKA
AIDIFITKSFNDNDQIYQKELMGKIHEEYQQMCQQNYETSRMQCEEVLRDVFDRLEKGIS
DGSYLKPGGSQKYTDMLRQLSEEYRARTNLQIMSEEVLSKFLKTKEDIGNMILQADESLN
SAEQEKEVEKMKTEILKQQKRSLKEQNRLQEQAFKDMQRTYDENVNHIIYQIEREQDRMR
RDNERVLEAKIRENKALLKLGFQWEAARMQSEIDSLKAEMVKDKSSQPSKLGRALNCIGM
ATTLLAPGFTPKMIGVGISMVSNFV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtggcggattaatgtccgctccggtgtgtctcattgaaaacgatgaaaatggg
aagctgcgtgtgagaaaagaggccaaagacattctagatgggataaatcagccggtggtg
gtggtgtctgtggttggactctatcgttcgggaaaatcttaccttatgaatcgcctggca
ggacaacagtcaggctttgctcttggcagcactattgaatcaaagaccaaaggcatctgg
atgtggtgtgtccctcaccccaaaaaagaaggacacactttggtgttgctggacacagag
ggacttggtgacgtaaagaagggggatgagaaacatgacacatggattttctgtttggca
gttcttctcagcagcactcttgtgtacaacagcttaggggtcattgacaacacggcactg
gaaaagctgcactacgttacagagctgacagagaacattcgtgtgaaggcagaagtgggt
caacacgagaacgagtcagcagatttcatgcgtgtttttccaacgtttgtctgggctgtt
cgtgacttcactctgcaactgataaaggaggataaagcaataacatcagatgactatctg
gagggtgcattggaattaaaacaaggtagctcacctcagtctgaacagtataacctgcca
cgcagatgtctgcgcaatttttttgcggtgaggaagtgctttgtgttccctcggcctgct
aatacggaagacatgtggagaatggagcagctgactgaaaacgaactggactcaaagttc
cttgagcaggcaaacacattttgcagctacatctacaacaattcagagacaaaaactgtc
agtggtggccgtacaattattggaacagctctgggtaatcttgctgaggtttacgtagag
gcaatacgcaccgggaaggttccatgtctggagaacgcagtcgtgtctctggctaagatc
cagaatgtccgtgcagtggaggaggccttgcagatctacatgactgagttgttcaacttg
attcatcttccaataaacccagcaaaactgtccatcatccactcagccacagagaaggcg
gccattgacattttcatcaccaagtccttcaatgacaatgaccagatctaccaaaaagag
ctcatggggaagattcatgaggaatatcaacagatgtgccagcagaattatgaaacatct
cgcatgcagtgtgaggaagttctgcgtgatgtgtttgatagactggaaaaaggcatttct
gacggatcatacctgaaacctggaggatcccaaaagtacacagacatgctcagacagctg
tcagaggaatacagagcaagaacaaacttacaaataatgagtgaagaagtgttgagcaag
tttttgaaaacaaaggaagatattggaaatatgattctacaagctgatgaatctctcaat
tcagcagaacaagagaaagaggtggagaagatgaagacagagattctaaagcagcagaaa
agaagcctgaaggaacagaaccggctacaggagcaggcatttaaagacatgcagagaacc
tatgatgagaatgtaaatcatatcatttatcagatagagagagagcaggacagaatgaga
agagacaatgaacgagtcctggaagcaaaaataagagaaaataaagcacttttaaagctg
ggcttccagtgggaggctgcccggatgcagagtgagattgacagcctgaaagcagaaatg
gtcaaagacaaatcatcacaaccctctaaattgggccgggctttaaattgtattggcatg
gcaacaactttgctcgcaccaggcttcaccccaaaaatgattggtgttggtatttctatg
gtatcaaattttgtttaa
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