Garra rufa (doctor fish): 141344285
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Entry
141344285 CDS
T11039
Symbol
ftr87
Name
(RefSeq) tripartite motif-containing protein 16
KO
K28076
finTRIM family protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141344285 (ftr87)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
141344285 (ftr87)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
U-box
zf-RING_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
141344285
NCBI-ProteinID:
XP_073705227
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All DBs
Position
10:7723269..7734010
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AA seq
531 aa
AA seq
DB search
MAGTNISVDKDQFCCSVCLEVLWEPVTIPCGHSYCMECIKGYWRKCELKEEYSCPQCRRT
FSPRPALCKNTILAEIVEKLRRTGIQDAGGKAADVECDVCTGKKHRAVRFCVKCQTFYCE
MHLKLHNERNRGRAHPLTEVTKQPQKRTCSRHNKLRDVYCRTDQQCVCSLCLKDGHKGHS
VVSVMEERTEIQKHLEEAWKKSKQRCKEREKELRDIVKYVKRSAQSVEDDSEKIFTRLLR
AVERKHLEVKELIRAEERTALSQTEKLLERLNQQIVEHRRGEAELEALSNTEDHIHFLQN
YKTLCAPLDTGGRPSIDVHPYFSLLILRKVLAELRDKVNEVCDRETTKIAELDCCDLTLD
PNTANSFLRLSGDRTEVTTVHEPQPYPDHPERFISWTQVLCTKGLSGRGYWEVEWGGGGG
VSIGVSYKTEGNIDQKLGCSSKSWSLDFSDSLCLFRHNKFSVEIHTPNPQRVGVHLNHGA
GTLAFYCVSLADDTMILLHREQTTFTQPLYPGFWVGLGCTLKLCRTFSFSA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaacgaatatctctgtggataaagaccagttctgttgctcagtgtgtttggaa
gtgctatgggagccagtcaccattccctgtggacacagttattgtatggagtgcattaaa
ggttactggaggaaatgcgagttgaaagaggaatacagctgccctcagtgccgacgcaca
tttagccccagacctgcgctgtgtaaaaacaccatactggctgaaattgtggagaaactg
aggagaaccggcattcaagatgctggtgggaaagcagcggatgtcgaatgtgacgtctgc
actggaaagaaacatcgagctgttaggttttgtgtgaaatgccagactttctattgtgag
atgcacctgaaacttcacaatgaaaggaatcgtggcagggcgcatccgcttactgaagtg
acaaaacagccgcagaaaagaacctgttcgcggcacaataaattgcgggacgtttactgt
cgtacagaccaacaatgcgtttgtagtttgtgcttaaaagacggacacaaggggcacagc
gtggtgtcggtgatggaggagaggacagaaatacagaaacatctcgaggaagcttggaaa
aagtcaaaacagaggtgtaaggaacgagaaaaggaactcagagacattgtgaaatacgtc
aagcgttcagcacaatcggttgaggacgacagcgaaaaaatcttcaccagactgctacgc
gccgtcgaaaggaagcatttggaggtgaaagagctgatcagagctgaggagaggacagct
ctcagccagacggagaagcttctagaacgactgaatcagcagatagttgaacacaggaga
ggagaggctgagctagaggcgctctcaaacactgaggatcatatccatttcctacagaac
tacaagacgctatgtgctcctcttgacaccgggggtcggcccagcatcgacgtccatccg
tatttctctttgctgatattgagaaaagttctcgcagagctgagagataaagtcaacgag
gtctgtgacagagaaacaacaaagattgcagaattagactgctgtgatttgactttagac
ccaaacactgccaactctttcctccgtctttctggagaccgtacagaggtcacgaccgtc
cacgagccgcagccgtatcccgatcacccagagcgcttcatcagctggactcaagtcttg
tgcaccaaaggtctgtctggacgtggctattgggaagttgagtggggaggcggtggagga
gtttctattggcgtttcctacaaaactgaagggaatatagaccaaaaactgggatgcagc
tcaaaatcgtggagcttagatttctcagattctctttgtttgtttcgacacaataagttt
agtgttgaaatacacactccaaatccacagagagttggcgtgcatctcaatcacggggct
ggaacgctggcgttttattgcgtttctctggcagacgatactatgattttgctgcatcgt
gagcaaaccactttcactcagcctctctatcctggtttctgggtcggacttggatgtact
ttaaaactctgtcgaactttcagcttttcagcttag
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