Garra rufa (doctor fish): 141344430
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Entry
141344430 CDS
T11039
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
grf
Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141344430 (fubp1)
03041 Spliceosome [BR:
grf03041
]
141344430 (fubp1)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
141344430 (fubp1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
141344430 (fubp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_PNO1_2nd
KH_Vigilin
KH_KHD4_2nd
Motif
Other DBs
NCBI-GeneID:
141344430
NCBI-ProteinID:
XP_073705422
LinkDB
All DBs
Position
10:complement(40147326..40159506)
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AA seq
664 aa
AA seq
DB search
MADYSSVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVPPSPASNEFGYGGQKRPLE
DGGEFIDQPETKKVPPSDPFSAVMGGMGGPPRSISEEFKVPDGMVGFIIGRGGEQISRIQ
QESGCKIQIAPDSGGMPDRSVTLTGSPDSIQAAKRLLSEIVEKGRPSPAFHHNDGPGMSV
QEVMIPSSKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQA
KDMVMDLIRDQGFREQRGEYGSRQGNGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGV
RIQFKPDDGSTPERIAQIMGPPDRAQHAADIITDLLRSVQAGGPPGHGGRGRGRGQGNWN
MGPPGGLQEFTFTVPTMKTGLIIGKGGETIKSISQQSGARIELQRNPPPNSDPNIKIFTV
RGSPQQIDYARQLVEEKIGVSDGPVSPMGGPHGPPGPHGGPSHGPPGPPGPPAPMGPYNP
GPYGQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPTVVCSADKAAADANAAAWAAYYSQ
YQQQPQGPMTPTSAAPGTTQTNGQGDPQAPGQSGQADYTKAWEEYYKKLGQGQPQQDYTK
AWEEYYKKQGQAAPQVAAAAAASQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGAAPQA
QQGQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccgactactctagcgtggctccaccgtcctcaaacgccggtggagggatgaacgat
gcttttaaagacgcccttcagagagccagacaaatagctgcaaaaataggaggtgatggt
gtacccccctctccagcttccaatgaatttggttatggaggacagaagagaccccttgaa
gacggaggtgaattcatagatcaaccagaaaccaagaaggttccaccaagtgatcctttt
tcagcagtaatgggaggcatgggtggcccaccaaggtctatatcagaggagttcaaggtt
ccagatggcatggttggcttcattattggaaggggaggagaacagatttcaagaatacaa
caggagtcaggttgcaaaatacagattgctcctgacagtggtggcatgcctgacaggtct
gtgacattaacaggctcacctgattcaatccaggctgcaaagaggttgctctcagagatt
gtagagaaaggcagaccttctccagcattccaccacaatgatggaccagggatgtctgtt
caggaggtcatgatcccttcctccaaagctggtctagtcatcggaaagggaggggaaaca
atcaaacagttacaggaacgtgctggagtcaaaatggtcatgattcaagatggaccccaa
aacacaggtgctgataaaccactcaggatctctggtgatccttttaaagttcagcaagct
aaagacatggtgatggatctaatcagagatcagggtttccgggaacagagaggagagtat
ggttctagacaaggcaatggaggagacagtttggatgtccctgtgccaaggtttgcagtg
ggaattgtgattggcaggaatggtgaaatgatcaagaagattcagaatgacactggcgtg
aggattcagttcaaaccagatgatggctccacaccagagaggatcgctcaaattatgggg
cccccagacagggcacagcacgcagcagatatcataactgatctgctgaggagcgtgcag
gctggaggcccccctggtcacgggggcagagggaggggccgtggacagggaaattggaac
atgggtcctcctggaggcctgcaggaattcactttcactgtgcctaccatgaagactggc
ctcattattggcaaagggggtgaaactattaaaagtatcagccagcagtcaggagccagg
atagagttacaaagaaatcctccacccaattcagaccctaatataaagatcttcacagtc
cgtggatcacctcaacagattgattacgccagacagctggttgaagagaagattggagtg
agtgatggtccagttagccctatgggtggccctcatggtcctcctgggccccatggaggt
ccttctcacggccctcccggtccaccaggaccacctgctcccatgggcccatacaaccct
gggccctatggccagggccctcctggaccacatggtcccccagcgccataccagcctcaa
ggctggggcaacggataccctcactggcagcaaggacagccagatcccactgttgtttgt
tcagcagataaagcggctgctgatgctaatgcggctgcatgggcagcctattattctcag
taccagcagcagccccagggccccatgacaccaacgtcagcagcccctggcacaacccaa
actaatggacaaggtgacccgcaagctccaggtcaaagtggacaggcagattacaccaag
gcctgggaggaatattacaagaaattgggtcaaggacagcctcagcaggactacacaaag
gcgtgggaagaatactataagaaacaaggtcaagctgcgcctcaggtggctgcagcagca
gcagcgtctcagcccggaggtcagccagattatagtgcagcgtgggcagaatactaccgc
caacaggcagcgtactacggccaaggtgccccacaggcgatgggagctgcaccccaggct
cagcagggccagtaa
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integrated database retrieval system
