Garra rufa (doctor fish): 141344535
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Entry
141344535 CDS
T11039
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
grf Garra rufa (doctor fish)
Pathway
grf03015
mRNA surveillance pathway
grf04261
Adrenergic signaling in cardiomyocytes
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141344535
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
141344535
09158 Development and regeneration
04382 Cornified envelope formation
141344535
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141344535
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141344535
03036 Chromosome and associated proteins [BR:
grf03036
]
141344535
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
141344535
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
141344535
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
141344535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
DUF6407
DUF4116
Motif
Other DBs
NCBI-GeneID:
141344535
NCBI-ProteinID:
XP_073705515
LinkDB
All DBs
Position
10:complement(26970131..27071878)
Genome browser
AA seq
977 aa
AA seq
DB search
MAATYRIVVSSINCYNSVVIDRRVQHTVHYCNGPCGALKHGLNCTVAHRSTCAELLDTSI
SRTCSDRPISIHESKTMENGNTGPGVFCDDYHQAVPRVKKGPAIQSSASLKDITGEAINL
ASGKIKEFSFEKIKYSSSHVTFRKGRKVRPDSFSRRSTDLDIIYGQFTGNDENCPPFGLF
QKSVLEEHKLSRSASLEQNLNNVATLYLNSLTEENLITRILEKTKADSSASGEDIKACLD
ILLKCSEDLKKCTDIIKQCIKRKSMGGSNDDSGNPEVIYKNVMARLSNYLKRLPLELEQG
QGVRQEHSELAELVNSIHGLQQIPFSPIFGNEQPPRYEDVVQSPPPTKPRAKPSQPEPPE
GSRDLAGNLKPIQSPTGLSARTPPSTNGFPHGNLPSASSSGSTPYICHHTVSTSRPDTFS
STNSLLSSSSESICKDAMEALYIEEEDSDVGRMPDRAVKGDGKHSCSISESRPFSKRPTG
YSEPDKLHELRNGPVFKPKNDSTVNQMYLPKSTDSRMCSRSTSHVNKGGSDDIDKLLMDL
ECLSQNMQKEPPLPPKLKNCAQQTGSPKHLIGNSLAKDLPVPGLSGPSVAKPSETGVEAT
KEDDGALLLRILESIESFAQELVESGAARGTQSKEREVMRLLQDTLASTKAEVAPLPLPV
PPSETVSTPAQTPKCTPASAPSSASAAVQTPASTVRDTGSTLLIQQTPEVIRIQPEKKPG
TPPPTLAPAPSSPTPRPPSPPPAKVVATPPPSSINIPRFYFPKGLPNCAANYDEAIAKIE
AAFTEFEEEKADIYEMGKIAKACGCPLYWKAPMFICAGGERTGFVSVHSFIATWRKLLHS
CYDDASKFVYLLAKPGCKYLEQEDFIPLLQDIVDTHPGLTFLKDAPEFHSRYITTVIQRI
FYTVNRSWTGKINMTELRRSNFLQTLALLEEEDDINQITDYFSYEHFYVIYCKFWELDTD
HDLFIDPKDLARYNDHV
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacctatcgcattgtggtcagcagtattaactgttataacagcgttgtgatt
gaccgccgtgtccagcacacggtacactactgtaatgggccctgtggcgcactaaaacat
ggactaaactgcacggtggctcaccgcagcacttgtgctgaacttcttgatacctccata
tctcgaacctgctctgaccggcccattagcattcatgagtccaaaacgatggagaatggc
aacaccggacctggagtcttctgcgacgactaccaccaagccgtccccagagttaagaaa
ggacctgccatccaaagctcagcaagccttaaggatattacaggggaagccatcaacctt
gcaagtggaaaaatcaaggagttttcatttgagaaaatcaagtactcctccagccacgtg
actttcagaaaaggccgtaaagttcggccggactccttcagcaggaggtccactgaccta
gacatcatctatggccagttcacaggcaatgatgagaactgtcctccattcggcctgttt
cagaaatctgtactcgaagagcataagctgagtcggagtgcatccctagagcagaaccta
aacaatgtggccacgctctacctgaacagccttaccgaggagaacctaattacccgcata
ctggagaagaccaaggcagacagcagtgcctcaggagaagacattaaagcctgcctggac
attctcctcaagtgctcggaagatctgaagaagtgcacggacataatcaaacagtgcatc
aaaagaaagtcgatgggtggaagcaacgacgactctgggaaccctgaagtcatttataaa
aatgtgatggctcgtctctccaactatctgaaaaggcttcctcttgagctggaacagggg
caaggtgtgaggcaggagcatagtgagcttgccgaactggtcaacagcatacacgggctg
caacaaatccctttctcccccatctttggcaatgagcaacctccacggtatgaggacgtt
gttcaatctcctccgcccacaaagcctcgagctaaaccctcccagccagaacctccagaa
ggttctagggatcttgcaggcaatttgaaacccattcagagccccactggtttgtcagca
cgtacacctccatcaactaatgggtttccgcatggcaacttgccttcagcatccagtagc
ggttcaacgccgtatatctgccaccacaccgtctcaaccagccgaccggacacattctct
tccacaaactcgctcttgtctagcagtagcgaaagcatctgtaaggatgccatggaggct
ctgtatattgaggaggaggattcagatgtgggaaggatgccggacagggcagttaaaggg
gatgggaagcacagctgtagtatttcagagtctaggccattctctaaaagacccactggc
tactccgagccagataaactccatgaactccgaaacggacctgtgttcaagcctaaaaac
gactcaacagtcaaccagatgtacttgccaaaaagcacagattctagaatgtgctctaga
tcaacttcacacgttaataaagggggatccgatgacattgataaactgttgatggacctg
gagtgtctttcccagaacatgcagaaggagcctccgctgccccctaaacttaaaaactgt
gcccagcagactggctcccccaagcatttgattggaaactcattggctaaagatctacca
gtgccaggtttgtctggaccctcggtggccaagccctctgaaacaggggttgaggccacc
aaagaggatgatggagctctgctgctcaggattctcgaaagcattgagagctttgctcag
gagctagttgagagtggagctgcgagaggaactcagtctaaggagcgggaggtcatgcgt
cttctccaggacacgctggccagcaccaaagcagaggtggctccgctcccgctgcctgta
cctccgtctgagactgtgtctacaccagcacaaacacctaaatgcacacctgcatcagca
ccctcaagtgcatctgctgctgtacaaacccctgcttctactgtaagggacacaggctca
acgcttctcattcaacagacgcctgaagtcatcaggatccagcctgagaagaaacctgga
acacctcctccaactctagcacctgcgccctcctcgccaaccccacggccgccaagccct
ccgccagccaaagtagtggccacacccccaccctcctccataaacattccacgcttctac
ttccccaaaggccttccaaactgtgcagccaactatgacgaagccattgccaaaatcgag
gcggccttcacagagttcgaggaagagaaagctgacatttatgaaatggggaagatagcg
aaggcatgcgggtgtcccctctattggaaagcaccaatgtttatttgcgctggtggagag
aggacaggttttgtttctgttcactcattcattgcaacatggagaaagttattacacagc
tgctatgatgatgcatccaagtttgtttacttgctggccaaaccaggctgcaaatacctg
gaacaagaagatttcatccctctgttgcaggacatcgtggacactcatccagggctgacg
tttttaaaagatgctcctgaattccattcccggtacatcacaacagtgatccaaagaata
ttttacacagttaatcgctcttggacaggcaaaatcaacatgacagagctcaggagaagc
aacttcctccagactctggccttgctggaagaagaggacgatatcaatcaaatcacagat
tatttctcttatgaacacttctatgtcatttactgtaagttctgggagttggacactgac
catgacctcttcatcgaccctaaggatctggccaggtacaacgaccatgtatag
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