Garra rufa (doctor fish): 141344618
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Entry
141344618 CDS
T11039
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00310
Lysine degradation
grf00514
Other types of O-glycan biosynthesis
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
141344618 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
141344618 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141344618 (colgalt1a)
Enzymes [BR:
grf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
141344618 (colgalt1a)
Glycosyltransferases [BR:
grf01003
]
O-Glycan biosynthesis
O-linked Gal type
141344618 (colgalt1a)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
141344618
NCBI-ProteinID:
XP_073705594
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Position
1:26204625..26221508
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AA seq
609 aa
AA seq
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MLCFVLFVSVLWSYLMNTGPAQGYFHEERWSPESPILAPRVMIALICRNAQHSLPHFLGT
IERLNYPKDRIALWVATDHNIDNTTYLLRDWLINVQKLYHYVEWRPKEEPRKFSDEEGPK
DWTNERYAYIMKLRQAALDSAREMWADYLMMIDCDNLLINRDVLWKLIKENKTIVAPMME
SRAAYSNFWCGMSSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRALAFH
PPHPDYTWAFDDIIVFAFSARMAEVQMFVCNKETYGHLPVPLRAHSTMQDEADSFIHTVL
EINVRNPPIEPSKYLPKPVKRPDKMGFDEVFMINLKRRTDRRDLMLRALREQEIDCKIIA
AVDGKAMNISEIHTLGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLKTSLV
LEDDLRFEIFFKRRLQNLMQEVESKDLDWDLIYIGRKRMQVDRPEKAVPNIRNLVEADYS
YWTLGYMMSLQGAQKLLKAEPLSKMLPVDEFLPVMFNKHPVLDYMEQFETRDLKAFSAEP
LLVFPTHYTGEPGYISDTETSTVWDNEKVHTDWDRKRSGKTREQAEISTEAQNSDVLQSP
LDRTARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtttcgtgttgttcgtgtcggtgctatggtcctatctgatgaatacgggacca
gctcaaggatacttccacgaagagcgctggagcccggagtctccgatattagctccccga
gtaatgatcgctctcatctgccgtaacgcccagcactcgctgcctcatttcctcgggaca
attgagcgcctcaattaccccaaagaccgaatcgcactgtgggtggcaaccgaccacaat
attgacaacactacttacctactgcgagactggctcatcaatgtacagaaactctaccat
tatgtggagtggaggccaaaggaggaaccaagaaaatttagtgatgaggaaggaccaaag
gattggacgaatgagcgctacgcctacatcatgaaactgcggcaggcagcgcttgactct
gctcgggagatgtgggcagactatctcatgatgattgattgtgataatctcctgatcaac
cgagacgtcttatggaaactaataaaggagaacaagacaattgtggcaccgatgatggag
tctcgtgctgcctattcaaacttttggtgtgggatgtcatcccagggctactataaacga
acccctgcctacatccccatgcgcaagcaagtgcgtaagggttgctttgctgttcccatg
gtgcactcgacttttctgattgacctccggaaagaagcttccagggcacttgcttttcac
ccaccacatccggactacacctgggcctttgacgacattatagtctttgctttttcagcc
cgcatggcagaggtccaaatgtttgtttgtaacaaggagacttatgggcatctcccagtg
cctcttcgtgcccacagcaccatgcaggacgaggcagacagcttcattcatactgtgctg
gagatcaatgtgcgaaatcctccaattgagccttccaaatacttgcccaaacctgtcaaa
agacctgacaaaatgggctttgatgaggtgtttatgatcaacctgaagcggcggaccgac
cgtcgtgacctcatgttgagggcgttgagagagcaagaaatcgactgcaagattatcgca
gctgttgatggcaaagctatgaacatcagtgagatccacactttgggaatccacatgctt
cccggctatagtgacccctaccatggcagacctctgacaaaaggagagctgggctgcttc
ctgtcccactataacatctggaaagagattgtagacagaggcctgaagacctcgctggtg
cttgaagatgatttgcgctttgagattttcttcaagcgccgcctgcagaatctgatgcag
gaggtggagagtaaggatctggactgggacctcatttatattgggaggaagaggatgcaa
gtagaccgccctgagaaagcagtaccgaacattcgcaacctggtggaggccgactattcc
tattggaccttgggttacatgatgtcattacaaggagcccaaaagctcctcaaagcagaa
ccactcagtaaaatgttgcctgtggatgagttccttcctgttatgtttaataagcatcct
gtattggattacatggagcagtttgagacaagggacctgaaagcattttcagcagagccc
ttgcttgtgtttcctacacactacacgggtgaacctgggtatatcagtgacacagaaacc
tccacagtgtgggacaatgagaaagtgcacacagactgggacaggaagcgctcgggtaag
acccgagaacaggctgagatcagcacagaggcccaaaactcagacgtactccagtctcct
ttggacaggacagcccgagacgaactatga
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