Garra rufa (doctor fish): 141344683
Help
Entry
141344683 CDS
T11039
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04217
Necroptosis
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
141344683
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141344683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141344683
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
141344683
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
141344683
Multi subunit type E3
LUBAC complex
141344683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
E3_UbLigase_RBR
IBR_1
IBR
RRM_PARP14_1
NID
UQ_con
zf-RING_2
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
141344683
NCBI-ProteinID:
XP_073705666
LinkDB
All DBs
Position
10:35813641..35831542
Genome browser
AA seq
877 aa
AA seq
DB search
MSRVTADLKYQTLLECNYCYPDEVLDDIKDVSTDFPHLQLYVDYYLYPNNDKKKLVYLGG
TVPVPYEGATYNIPVCIWIHETHPKNPPRCFVCPSPSMIINSKSSNVDANGRVLLHCLSN
WKIGWSNLSIVLEEMIAAFQRETPLFATYPVRTPPLHSQGKPLQAELVVQPNPVSSYGSW
PHTGSSSVQKMSTAQHGASVSSLPQHANNSLPKSTKSQINLHQASETEMSGVRRSYTQEL
LDFGITFGAQALETNHQTNPFISPASAPTSNASNVDDIDDLFKSLQLQRVVNMYQLSNRE
KDVYNAEGAWQDCGAGVQSGLVDDRHKVVVSQLPVGVSPSKMKNKLTIFFQRRQNAGGEV
LDVKYPAAQPDQAWVLFRHWRDAEHVLRQPDRVITINEQQFLIQLKRFEDMEIPGGVQGE
KAEMFRSLLSLEGCSFSSTDVLEAVQSCRDLPSALKYLCHDCPICQEQVSFNRMITMTHC
CCTFCESCFKKYFSSVIKEKNIVHAVCPLCNLPDVQRGRREESMEYFSLLDTQIRYYLDP
QIHELFQRKLRDQALQEMPNFRWCAHCCFGLLHEADRLRMDCPSCGKSTCFQCKRPWAPQ
HEGISCEKFKEWEQLNSPEYQNSRLEQLLSRNKIDCPKCKFRFFLARGGCLHFRCTQCQH
EFCGGCSQPFKQGSACNFSIECRAKGLHAHHPRNCLYHLRDWSVQRLRTLLQHYGVSHPL
MFSPKNTAGRHSKGICGVMEFQESGAVKEEPCGRPALPEYSGYCTVHYKEFLVELINSNA
LDPVVLLDVAELRAEMDRWKVPVPDKQPSEPDQRYADRLRQILKERVRLTSGAASGLRAA
APPTPSPSSPPAAGAPWYSILSRAVPEDSQQLLLLTD
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcgttacagctgatctgaagtatcaaacacttctcgagtgtaattactgttac
ccggatgaggtccttgatgacatcaaagatgtgtcgacagatttcccacacctgcagcta
tatgtggactattatctctatcccaacaatgataaaaagaagttggtttatttgggtggc
accgttcctgtaccatatgaaggtgctacgtacaacattcctgtttgcatctggatccat
gagacccatcccaaaaacccacccaggtgttttgtctgcccttcaccctccatgatcatc
aattctaaaagcagcaatgttgatgccaatggccgcgttcttctccactgtctcagcaac
tggaagattggctggtcgaacttgtcaatagttctggaagaaatgattgctgcctttcag
cgtgaaactcctctttttgccacctatccagtcagaacccctccgctacattctcaagga
aaacccctgcaggctgaactggtagttcaaccgaatcctgtttcatcctatggcagctgg
ccacatacaggcagcagttcagtgcaaaaaatgtcaacagctcaacatggagcgtccgtc
tcatctttgcctcagcatgccaacaacagtctacccaagagtacaaagtcccagataaac
ctgcatcaagccagtgaaacagagatgagcggggtaaggagatcatacacgcaagagctg
ctggatttcgggatcacgtttggtgcgcaagctttggagaccaaccaccaaacaaaccca
tttatttctcctgcctcagctcccaccagcaatgcttctaatgttgatgacatagacgac
ctgttcaaaagccttcaattacaacgagttgtcaacatgtaccaattgagcaacagggag
aaagatgtttataatgctgaaggagcttggcaggattgtggtgctggagttcaatcaggc
ttagtggacgaccgtcacaaggtggtggttagccagcttcctgtgggtgtctctcccagc
aagatgaagaacaagctcactatcttcttccagcggaggcagaatgcaggaggagaggtt
ctggatgtcaaataccctgcagcgcagccagaccaggcttgggtgctcttcagacactgg
agagatgcagagcatgttctgaggcagcctgacagggtgattaccattaatgagcagcaa
tttcttattcagctgaagaggtttgaggacatggagatcccaggtggtgttcaaggtgag
aaagctgagatgttcaggagtctcttgagtctggaggggtgcagtttcagctccacagat
gtcctggaagcagtgcagtcgtgccgagacctcccctctgctctgaaatatctctgccat
gattgccctatatgccaggagcaagtatccttcaacaggatgatcaccatgacacactgc
tgttgtacattctgtgagagctgttttaagaagtacttctcctctgtcattaaggaaaag
aatatagtacatgctgtttgtcccctctgtaatcttcccgatgtacaaagaggccgcagg
gaggagtctatggagtacttcagcctactcgacacacagatcaggtattatctggacccc
cagatccatgagctcttccagagaaagctcagagaccaggcactgcaggaaatgcccaac
ttccgctggtgtgcacattgttgctttgggctccttcatgaagcagacaggctgagaatg
gactgccccagctgtgggaaaagcacatgctttcaatgtaaaaggccgtgggctccacag
catgaaggaatctcatgtgagaagttcaaagaatgggagcaactcaacagccccgagtac
caaaactcaaggctggagcagctcctcagcaggaataaaatagactgcccaaaatgcaaa
tttcgcttcttcctggccagaggaggctgtttgcatttcagatgcactcagtgccagcac
gaattctgtggaggatgcagtcagccttttaaacaaggctctgcctgtaatttttctatc
gagtgcagagctaaggggttacatgctcatcaccctcgaaactgcctttatcatctgaga
gactggagtgtccagagactacggaccctgcttcagcactatggggtatcacatcccctc
atgttcagccccaaaaatacagcagggagacactctaaaggtatttgtggtgtaatggag
ttccaagaatcaggagctgtcaaggaggagccatgtggacgaccagctcttccagagtac
agtggttactgcacggtacattataaagagtttctggtggagctaataaacagcaatgca
ctggaccctgtggtactgctagatgttgcggaactgagggcagaaatggaccgctggaaa
gtgccagtaccagataaacaaccttcagaaccagatcaacggtacgcggacagacttcgg
cagatcttaaaagagagggttaggctgaccagcggtgcagcttctggattgagggcagct
gctcctcccacaccttccccctcttctcctcctgcggctggagctccatggtactccatc
ctgagccgggccgttcctgaggactcccagcaactcctgctgctgaccgattga
DBGET
integrated database retrieval system
