Garra rufa (doctor fish): 141344738
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Entry
141344738 CDS
T11039
Symbol
gbp2
Name
(RefSeq) guanylate-binding protein 2
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141344738 (gbp2)
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
NuDC
DUF2853
Motif
Other DBs
NCBI-GeneID:
141344738
NCBI-ProteinID:
XP_073705733
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Position
10:complement(13729679..13741997)
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AA seq
625 aa
AA seq
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MAFGGFMSAPVCLIENDEKGKLHVKKEAKDILDGINQPVVVVSVVGLYRTGKSYLMNRLA
GKQSGFALGSTIESKTKGIWMWCVPHPKKEGHTLVLLDTEGLGDIEKGDAKHDTWIFCLA
VLLSSTLVYNSLGVIDNMALEKLHYVTELTENIRVKAEVGQHEDESADFMRVFPSFVWAV
RDFTLELKRGDKVITSDEYLEGALKLKSGSSRETEQYNLPRRCLRHFFAVRKCFVFPRPA
GTQNMRRMEQLTEKELDSEFLEQANTFCNYVYNNSEPKTVTGGRAVTGTALGNLAEVYVE
AIRSGNVPCLENAVMSLAKIQNVRAEDEALQLYMTEILSMAELPMCPEKLSDIHKIAEKK
SIEVFITMSFNDNDQIYQKELMAKIHNEYQDMCQQNYEASRMQCEEVQRDVFDKMEKSFS
NGLYFKPGGYRQYRDTLTELTNDYRARTRTQIMSEEVLSTYLREKEKLGNMILQADESLS
AAEQENEVQRLKNEILEQRKKGLEEQNRLQEQTFKDMQRTHQEHVNQIVSQMEREQERIR
RDNDRVLDAKLKEREALLQQGFQEEAARMQREIDSLKGDMNKQETSQRSTVSQVVDGIGT
AASLFLPGFVPKLAGFGLSLISRLF
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttggcgggttcatgtccgctccggtgtgcctcattgaaaacgatgaaaaagga
aagctgcacgtgaagaaagaggccaaagacattctagatgggataaatcaaccggtggtg
gtggtgtctgtagtgggactctaccgtactggaaagtcttaccttatgaaccgcctggca
ggaaaacagtccggctttgctctcggcagcacaattgaatcaaagaccaaaggcatctgg
atgtggtgtgtccctcaccctaaaaaagaaggacatactctggtgctgctggacacagaa
ggacttggtgacattgaaaagggggatgcgaaacatgatacgtggattttctgtctggct
gttcttctcagcagtactctagtgtacaacagcttaggggtcattgacaacatggcactg
gaaaagctgcactatgttacagagctgacagagaacattcgtgtgaaggcagaagtgggt
caacatgaggacgagtctgcagatttcatgcgagtttttccatcgtttgtctgggctgtt
cgtgattttactttggaactgaaaaggggggataaagtaataacatcagatgagtatctg
gagggtgcgttgaaactcaaatcaggtagctcacgtgagactgagcagtataacctgccc
cgtcgttgtctgcggcatttctttgcggtgaggaagtgcttcgtgttccctcggcctgct
ggtacacaaaatatgcggagaatggagcagctgaccgagaaagaactggattcagagttc
cttgagcaggcaaacaccttctgcaattatgtttacaacaattcagagccaaaaactgtc
actgggggtcgtgcagttactggaacagctctgggtaatcttgctgaggtttacgtagag
gcgatccgcagcgggaatgttccttgcttggagaatgcagtcatgtctctggctaagatc
cagaacgtccgtgcagaggacgaggccttgcagttgtacatgactgagatactcagcatg
gctgagcttccaatgtgcccggagaagctgtctgacatccacaaaattgcagagaagaaa
tccatcgaagttttcatcaccatgtccttcaatgacaatgaccagatctaccaaaaagag
ctgatggcgaagattcataatgaatatcaagatatgtgccagcagaattatgaagcgtct
cgcatgcagtgtgaggaagttcagcgtgatgtgtttgataagatggaaaaaagcttttct
aatggtttatacttcaaacctggaggatatcgacagtacagagacacgcttacagagctg
accaatgactacagagcacgaacacgcacacaaataatgagtgaggaagtgttgagtaca
tatttgagagaaaaggaaaagttaggaaatatgattctacaagctgatgaatctctcagt
gcagcggaacaggaaaacgaagtgcaaagactaaagaacgagattctggagcagaggaaa
aagggtctagaggaacagaaccggttacaggagcagacgttcaaagatatgcagcgaact
catcaggagcatgtgaatcagatcgttagtcagatggagagagagcaggaaagaatcagg
agagacaatgatcgagtcctggatgcaaaactgaaggaaagggaagctcttctacagcag
ggctttcaggaggaggctgcccggatgcagagagaaattgacagcctgaaaggagatatg
aataaacaggaaacgtcccaacgctcaacagtaagccaggttgtggatggtatcggcact
gcggcatctttgtttttgccaggtttcgttcctaaattagctggttttggtctgtcctta
atttcaagactattttga
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