Garra rufa (doctor fish): 141344739
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Entry
141344739 CDS
T11039
Name
(RefSeq) guanylate-binding protein 3-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141344739
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
141344739
NCBI-ProteinID:
XP_073705734
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Position
10:13720741..13729446
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AA seq
620 aa
AA seq
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MSEARLMPSPICLVENVNGSLNVRKDAIDVLSRINEPVVVVSVVGLYRTGKSYLMNRLAG
QQSGFALGNTIESKTKGIWMWCVPHPNKEGHTLVLLDTEGLGDVDKGDSKNDSWIFCLAV
LLSSTLVYNSRGTIDNNALENLHYVAELADNIKIRSTEAADEEEDENSKFVQFFPSFIWV
VRDFTLELVIDGKTVCEDEYLEFALQLKKGVSTKINNYNLPRQCIRSYFPSRNCFVFPSP
ASPENMKRLESLQERDLVPDFLKVTNHFCKHVFYNSVVKTLKGGHRVTGKLLGHLAEIYV
DTINSGKVPCLDNAVIALANQENQIAVQEALKVYQSGMEEVKNKFPVGVDDISSEHQKFS
SLATREFMKRSFKDEKREYLNKLKEDIDTYYMCLLQENEMASEKKCRGLLKDLFSEMNKR
LQEGKYSQSGGYELYCRDRDTIVEQYRREPNKGVSAEAMLNEFLNERGPEANSILYTDTK
ITENDRKIQEEKEKNALLQQNLKEEEEKRIESERMRKAEMERQEDQIRQMQEKFNKELEQ
QQQEMERAIECKLNEQKDMLKKGFDEKADLLNEEITNLKKEKESSGGFMKDIVMPLLGTV
TELLPSFLNYRVLMKGLKKV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagccagactaatgccttcgcccatatgtttggtggagaatgttaacggatca
cttaacgttcgtaaggacgccattgacgttctgagtaggatcaatgagccggtggttgtg
gtgtctgtggtgggactttatcgtacagggaaatcctatcttatgaaccgcctggcagga
caacagtcaggctttgctcttggcaatactattgagtcaaagaccaaaggcatctggatg
tggtgtgtccctcacccaaataaagaaggacacactctggtgctgctggacacggaggga
ctgggtgatgtggacaagggagactctaagaatgacagctggatcttctgtttggctgtt
ctgctcagcagcactctggtgtacaacagccgcggcaccatcgataacaatgcactggag
aatctgcactatgttgctgagctcgctgacaatatcaagatcagatcgacagaagcagca
gacgaggaggaagacgagaattctaagtttgtgcagtttttcccatcattcatttgggtt
gtgagagatttcaccttggaattggtaattgatggaaaaacagtgtgtgaggacgagtac
cttgaatttgccctccagctgaagaaaggtgtgagcactaaaatcaacaactacaatctg
cctcgtcaatgcatccgaagttatttcccatcccggaactgttttgtattcccatcccca
gcatcgcctgaaaacatgaaacgtttagaaagcttgcaagaacgggaccttgtacccgat
tttctgaaggtcacgaatcatttctgtaaacatgttttttacaatagtgttgtgaaaaca
ctgaaaggaggacacagagttactggaaaattactcgggcatctggctgagatttatgta
gacacaatcaacagtggaaaagtgccctgtctggacaatgcagttattgctcttgcaaat
caagagaaccagatagctgttcaagaagctctgaaagtctatcagagtgggatggaagag
gtgaagaacaaatttccggtaggtgtggatgatatttcctcagaacaccaaaagttcagc
agtctggccaccagggagtttatgaaacgctcctttaaagatgaaaaaagagaatacctg
aataaactgaaggaagacatagatacgtactatatgtgcctgctgcaagagaatgagatg
gcatcagagaaaaagtgcagaggtctgctgaaggatctgttctctgaaatgaataagcga
ctacaggaaggaaagtacagtcagtctggaggatatgaactctactgcagagacagagac
accattgttgaacagtaccgcagagaacccaataaaggtgtttcggctgaggccatgctg
aatgagtttctgaatgagcgaggacctgaagcaaacagcatcctctacacagacacaaaa
atcactgaaaatgacagaaagattcaagaggaaaaggaaaagaatgctctgctgcaacaa
aatttgaaagaggaagaagaaaaacgcatcgagagtgagcgaatgaggaaggcagagatg
gagcggcaggaggaccaaattaggcagatgcaggagaagttcaacaaggagctggagcag
cagcagcaggagatggagagagccattgagtgcaaactaaatgagcagaaggatatgcta
aagaaaggctttgatgagaaagctgatctcctgaatgaagagataacgaatctaaagaaa
gaaaaggaaagttccggtggttttatgaaggatattgtgatgcctcttttaggaactgtg
acagaactccttccatctttccttaattatagagtgctgatgaaaggactcaaaaaagta
taa
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