Garra rufa (doctor fish): 141344743
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Entry
141344743 CDS
T11039
Symbol
nfatc4
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 4 isoform X1
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04148
Efferocytosis
grf04218
Cellular senescence
grf04310
Wnt signaling pathway
grf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
141344743 (nfatc4)
04020 Calcium signaling pathway
141344743 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141344743 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
141344743 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141344743 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141344743 (nfatc4)
Transcription factors [BR:
grf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
141344743 (nfatc4)
SSDB
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Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
141344743
NCBI-ProteinID:
XP_073705738
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All DBs
Position
10:complement(15340188..15361491)
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AA seq
871 aa
AA seq
DB search
MGAAPGSGWEEGEFEFKLVFEEDPPRQSRCGPEETESGQTHHEPAGTSDTQLTSAQAGQP
VGIPSSSGRRAGMHSPPPRRALVRDFSGTYESLPARSIQVSESRVLECPSIQITTISPED
DSGPAGGSYWDGGGGWDRERLYLPLLDSYRDVMTGAGSLSPSPSPASSSSSRGWLSPASS
CDSLLVEEDELNEATAHFCLSPSSRPTSPGGKKRRNSPLASPSSSRRSSYSEDLSSLPDT
GETSTQSQAPASCELNIPQKTRKTSLEQMSSRDIEPELTPVQTSPCPLPEVAQMRREPPT
LGMDYLSVPPALGWGRTRASAHSPLFRSNALPPLDWPLPSQFDQYELRIEVQPRPHHRAH
YETEGSRGAVKASPGGHPVVKLTGYTERQPLSLQVFVGTADDRSIRPHPFYQIHRVTGKM
VGTASQESIQAGTKLLDIPLNPENNMTALIDCAGILKLRNSDIELRKGETDVGRKNTRVR
LVFRTHLPLSPPIVPPGRVLALQVASLPIECSQRSAQELPVVESISLTSCSTEGGEELLL
GGTNFLPTSRVFFMERGSDGKVQWEEEAHVDRDKNSENLLCVRVPAYNDLSLNHPVSVCL
YVSNGKRKRSSTHCFKYLPIMFKEEDSLLSRPSILPLEGVTLCPMGSSSAVDMRSDLSAD
DRSMSFHLPPYPNEYSYSSHGYQEDYCRKPEVPEDGGGRGALTERHPSFESLELGFTELL
PPMYPRASQPLSPSPSPSPWLDSPYLSSSPSPSHSCSLSPFPASSPISTSPLPPLSHSPY
PHCPCPQDMCSSPPSNTSHYQELCPPPYGQYESWEHQMRPAERDAGMKLEGTPDFTGPSP
MQHITLEEVTEFIGEDIRSFQMGSHMDSRPG
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggatgggaggagggagagttcgagttcaagctcgtgttc
gaggaggatccgccgcgccagagccgctgcggcccagaggagaccgagagcggccagacg
caccatgagcctgccggtacgagcgatacccagttgacttccgcccaagctggccaaccc
gtgggtatcccatcgtcatccggtcgcagggctgggatgcattccccacccccaagacgg
gcattagtcagggatttcagtgggacttatgagagcctaccagctagatcaatacaggta
tcagagtcaagagtgcttgagtgccccagcatccaaatcaccactatctcccctgaagat
gactcaggtccagcggggggaagttactgggatggtgggggcggctgggacagggaacgt
ctatacctgcccctgctggactcttaccgtgacgtgatgacaggggcaggttccctcagt
cccagccccagccctgcttccagttcctcatctcgtggatggctgagtccagcatccagc
tgtgattctctcctggtggaggaggacgagctcaatgaagctactgcccatttctgccta
tcgccctcctcgcgccctacgtctcctggaggcaaaaagcgcaggaactcgccactggcc
tcccccagctcctcccgcagaagcagctactccgaggatctctcctccctcccggataca
ggagaaacctcgacacagtctcaggctccagcgagctgtgagctcaacatcccacagaag
accaggaagacctctctggaacagatgtcatcaagagatatcgaaccagagctgaccccc
gttcagacctctccctgcccccttccagaggtggctcagatgaggagggagccccccaca
ctagggatggactacctgtctgtgcctcctgctttgggctggggcagaaccagggccagc
gctcacagtcctctctttagatctaatgcactgccgccacttgactggcccttgccgtcg
cagtttgaccagtatgaactgcgcatagaggtacagcccagaccacaccaccgcgcgcat
tatgaaactgaaggaagtcggggagcagtaaaggcatcacctggaggccatccagtagta
aagctcacgggttacactgagagacagccgctctccttacaggtgtttgtaggaactgct
gatgacagatcaatacgtcctcatcctttttatcaaatacacagagtaacagggaagatg
gtaggcacagctagtcaggagagcatccaggctggcaccaaactcctggacattccactc
aacccagagaacaacatgactgccctcattgactgtgcaggtattctaaagctgaggaac
tctgacattgaactccggaaaggagagacagatgtagggagaaagaacactcgagtgcgt
ttggtgttccgcacacaccttcctctgtctccacccattgtacctccaggacgagtctta
gccctgcaggtggcctctttacccattgaatgctcacagcgctctgcacaggagcttcct
gtagtggagtctatcagtcttacttcctgttcaacagagggaggcgaggaactacttcta
ggtgggaccaactttctacccacctccagagttttctttatggagagaggatcagatggc
aaggtccagtgggaggaggaggcacatgtggacagggataaaaacagtgagaatttgctg
tgtgtacgagtgccagcctataatgatctttcgctgaaccacccggtatcggtctgcctg
tacgtgtccaatgggaaaaggaagaggagcagcacgcactgctttaaatatttgccaatc
atgtttaaagaggaagattctctgctgtcccgtccctccatcttgcccctggaaggggtg
acgctttgccctatgggtagcagcagcgctgtcgacatgaggtcagacctatccgcagat
gacagaagcatgtctttccacctgcctccatatcccaacgagtactcatactcctcgcat
ggctaccaggaggactactgccgcaagccggaggttcccgaggacggtggaggtcgaggt
gccctgactgaaaggcatcccagctttgagagccttgagttgggcttcacagagcttctt
ccccccatgtacccaagagcctcacaacctctttctccctccccgtctccctctccttgg
ctggactctccctatctgtcgtcctcaccttctccgtcacactcttgctctctaagccca
ttccctgcaagcagtccgatctccacctcgcctcttcctccgctctctcactctccatat
ccacactgtccttgcccccaagatatgtgctcctcacctccgtcaaacactagccactat
caggaactgtgcccacctccgtacggccaatacgagagctgggaacaccagatgcgtccc
gctgaaagagacgcaggtatgaagttggagggaaccccagactttacaggcccttctccg
atgcagcatatcacactagaggaagtgactgaattcatcggagaggatatcagatccttt
cagatggggtcacacatggacagtcgacctggatga
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