Garra rufa (doctor fish): 141344794
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Entry
141344794 CDS
T11039
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141344794
04121 Ubiquitin system [BR:
grf04121
]
141344794
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141344794
Membrane trafficking [BR:
grf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
141344794
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141344794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
Zn_ribbon_19
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-Nse
zf-RING_16
HypA
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
141344794
NCBI-ProteinID:
XP_073705792
LinkDB
All DBs
Position
10:5881154..5898566
Genome browser
AA seq
309 aa
AA seq
DB search
MAEAPPRPCRFFCHRCSEEISPRLPDYICPRCESGFIEELPEEGSSENGSTSTASNDQNR
PSFENVDQHLFTFPHGYGQFALGIFDEGFDFRGGLPAEDNRDAENRREREMASRQRYGAR
QPRGRHVPRRQGARHEGVPTLEGIIQQLVNGIIAPTAMPNMAMGPWGMLHSNPMDYAWGA
NGLDAIITQLLNQFENTGPPPADKEKIKNLPTVQITQEHVGAGLECPVCKEDYSAGENVR
QLPCNHLFHNDCIVPWLEQHDTCPVCRKSLSGQNTATDPPGLSGMNFTPSSSSSSSSSSP
SNENATNNS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcccccgcggccctgccggttcttctgtcaccggtgttcggaagagatc
agccctcggctcccggattacatctgtccgcggtgtgagtctggattcattgaagagtta
cctgaagagggaagttcagagaatgggtccacatctacagcctctaatgatcagaatcga
ccttcgtttgagaatgtggaccagcacttgtttacgttcccacatggttacgggcagttt
gctctggggatcttcgatgagggcttcgacttcagggggggtttgccagcggaagataac
cgtgatgccgagaaccgcagagaacgggagatggcctcacgacagcgctatggggcgaga
cagccacggggacgacacgttccccggagacaaggggcacggcatgagggtgtacccact
ttagaaggaatcattcagcaattagttaatggaattattgctccgacagctatgccaaac
atggcgatggggccatggggaatgctgcactcgaacccaatggactatgcatggggtgcc
aatggattagatgccatcataacacagttattaaatcagtttgaaaatacgggtccccct
ccggcagacaaagagaagattaagaatctccctacagtccagataacacaggagcacgtg
ggtgctggtctagagtgtcctgtctgtaaagaagactacagcgcaggagagaacgttaga
caacttccttgcaatcatctctttcataacgactgtatagttccctggctcgagcagcat
gacacgtgtccggtgtgcaggaagagtttgagcgggcagaacacagccacggatccgccc
ggcctatcagggatgaatttcaccccctcttcctcctcctcttcctcctcaagctctccg
agcaacgagaacgccaccaataactcgtaa
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