Garra rufa (doctor fish): 141344856
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Entry
141344856 CDS
T11039
Symbol
gata6
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141344856 (gata6)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
141344856 (gata6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
141344856
NCBI-ProteinID:
XP_073705856
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Position
10:38789740..38796071
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AA seq
500 aa
AA seq
DB search
MDLGDNSWSMVKREVSSSSPGSPAEQSYLNTDRRDRLRSPAPTHLDAVGTRRAEGRPLHS
YVHFGHPNNALPNSDDVTLFTDLDQGNKLIISGGHTRETHKGGLIVDPTDMYQTLAIAAA
QSQAGYNDTPSAGYMHSNPNSPVYVPTSRVGTMIPSLSYLQPSVSSQPSHAVSSHSVWSQ
SAPESPSYSTGSPHTSNRFHYSPSPPMNNGTSRDTSYSTPLNVNSRDQYLSRQISGSYTS
PYPSYVAPQLSQLPAAWPAGPFENSMLHSLQSRSAPLSIRGPNGDLLEDMVESRECVNCG
SISTPLWRRDGTGHFLCNACGLYSKMNGLSRPLIKPQKRMSSSRRIGLSCANCQTSTTTL
WRRNADGEPVCNACGLYTKLHGVPRPLAMKKEGIQTRKRKPKTLNKTKGSSGSSSVPMTP
TSSSSSNSEECTKNSPSSTQVPVTSVNSSTLVGQVDVPGTTGSMVKYPGQESLYTNVGLT
STADVATSVRGDTWCPMALA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggacctgggcgataacagctggtccatggtcaagcgcgaagtgtccagcagcagccca
gggtctccggctgagcagagctacctgaacactgaccggagggaccggctgagatcaccg
gcgccgacgcacctggacgcggtgggaacgcgtcgcgccgagggcaggcccctacactcc
tacgtccactttgggcatcccaacaacgccctgcccaattctgacgacgttacactcttc
acggatttagaccagggcaacaaactcatcatctcaggtgggcacaccagggagacgcat
aagggaggcttaattgtggaccctaccgacatgtatcaaaccctggccatcgccgcggcc
cagagtcaggccggttataacgacacgccatcggccggttacatgcactccaaccctaat
tctcccgtttatgtaccgacgtctcgcgttggaacgatgatacccagtttatcgtaccta
caacccagcgtgtcatcgcagcccagccatgctgtcagcagtcattcggtctggtcacaa
tccgcaccggagagcccgtcctacagcactggaagcccacatacctccaaccgtttccac
tactcccccagtccgcctatgaataacggcacatcgagggataccagctatagtactcct
ctgaatgtaaacagtcgagaccagtacctttcacgacaaataagtggatcttacacaagc
ccgtatccttcgtatgttgcaccgcagctatcacagttaccggcggcgtggccagcaggg
cccttcgagaactccatgctgcattccctgcaatccagaagcgcaccactgtctatcagg
gggccaaatggagatttgctggaggacatggtggagagccgcgagtgcgtcaactgcggc
tccatttccaccccgctgtggagacgcgacggcacgggtcactttctctgtaacgcctgc
ggtctgtacagcaaaatgaatggactcagccgaccattaattaaacctcagaagcgtatg
tcgtcttcgaggcggatcggcctgtcctgcgcaaactgccagacgagcactacaacattg
tggcgcagaaacgcagacggagagcccgtgtgcaacgcgtgtggactttacacaaagtta
cacggggtgcctaggccccttgccatgaagaaagaaggtattcagacgaggaaaagaaaa
ccaaaaactttgaacaaaacaaagggatcatctggaagcagttctgtcccaatgactcca
acttcttcatcgtcttctaattcagaggagtgcacaaagaacagtccttcatcaacacag
gtgcctgtaacatcagtcaactcttcgacgctggtgggccaagttgatgttccaggcacg
acgggctccatggtgaaataccccgggcaggagagtctgtacacgaatgtaggcctgacg
tccacagctgacgtggcaacctccgtgcgaggggacacttggtgccccatggccttggcc
taa
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