Garra rufa (doctor fish): 141344946
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Entry
141344946 CDS
T11039
Symbol
acin1a
Name
(RefSeq) uncharacterized protein acin1a isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03015
mRNA surveillance pathway
grf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141344946 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
141344946 (acin1a)
03015 mRNA surveillance pathway
141344946 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141344946 (acin1a)
03041 Spliceosome [BR:
grf03041
]
141344946 (acin1a)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
141344946 (acin1a)
Spliceosome [BR:
grf03041
]
Complex C
Other components
EJC/TREX
141344946 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
141344946
NCBI-ProteinID:
XP_073705936
LinkDB
All DBs
Position
10:complement(15732028..15750772)
Genome browser
AA seq
1866 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALVKRLKGALMLENLQKTSTHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAETDGTDHEDHTEANDNVC
AVTNQDVAPSLVDQHKGGTAVAGGFGNESDELREKETPGQPSPSAPAQAGAIASLSVRVV
GERGPTSSHVAADSDDDSEGGDDNDDEEEEWNAKAQRSRRAQPSRSQPVRERSGGSQQQQ
QPPPQHIPLLSQQLRQPTPPPSPPPELSFPLPDTPKQSPPSPGEPPSRQRISSSSSSGSS
SSDSRSSSPEPAGDSSERRPGPLTLLARKMESEGAFSGAGKRDREGMDGQRSHHEGGVSA
ITHTANAASVLSYPSSVISNQGVSVVRSAVVEASDGVKLKENKKRERQREQERLKALEKE
REEKALVEERAKVLERERQEREEALKRERALQREREEKEKALQREREERERLEREQALER
ERLEREQALERERQEKERLERERQEALERERVERERLEKERQEREQALERDRLERERLEK
ERQEREQALERERLERERQEREQALERERLERERLEKERREREQALERERLERERLEKER
QEREQALERERLERERLEKERREREQALERERLERERLEKERQEREEALERERLEKERLE
KERLEQEEALERERLERERLEKERQEREEALERERLEKERLEKERQEREEALERERLEKE
RLEKERQEREEALERERLEKERLEKERLEREQALERERLERERLEKERQEREEALERERL
EKERLEKERQEREQALERERLEKERQEREKQEKEQALERERQEKERQEREQALERQEKER
QEREQALERERLEKEAALEKERQEMERAKEQERLEKERALEKEREAALERERQEQERLEK
EKALEEERLQKEQALEREREAQRKAEEERERALEKEREEQERALREEQQRALEERGRLLV
QKRVQEEKEKALKHEKEEEREKERESRLPPLKRGRDIGGLSCPAAQPASQESPSGKPDES
ETGEPQSTGKDALSTEPVPQQSPTPATPLSPQSSSKKSRFLRDAPATTPLQSSPTSVLKR
PRTFSDNPMPQAPSVPLASKPKEDAPQTSSGLVSAPHEPESKIPEVSAQQQAPKEEEKME
TSKDSEASKDTKRKTLRRVEDEEKPSLPPPEEKKRGREKEKKEVGKKERNSSSSSDSSSS
DSDSGSSSSSRSSSSSSSEEDEKSRSTSGGRKTKEVHKDSSSQATEKVGQTVAEKPPTAQ
RKKRVFTEQEEKDMGNEDVIQTKKPCLELQDETVTRGRKDDIDEDDTSKDTTSEVKEAVM
AEPEKVPESIEESTTPKTFSARRISLGSSKQSPGVVSSEGEAEAASSAGAGRKRRWGSST
AVTAKKPSISITTDSLKSLIPDIKPALGQEAVLDLHPEEMHLSGEEEGGERGDQDLKIRR
TVTQVVSSDTQENGQKESKRSEPEDEEQRSEGQDRLSQEEKMEGSIQVSMETEPLSPGRD
VDMKTVTPSDTLIRRSISQQKSGVSITIDDPVRTAKQPSPPRGKLSNIVHVCNLVRPFTL
GQLKELLNRTGTVVEEDFWIDKIKSHCYVTYSSAEEAMATRTALHGVKWPQSNPKFLSVD
FCSQEELDFHRGLGPAGEKPTEEPRGAAATGPGRSVPLPLLPERDQWAEREREMERRERT
RAEREWDRDKVRDFSKPGEEREAGAKRSRSRDRERRRKERGKSKERKTDKKEKGPEDPPA
KLLDDLFRKTKAAPCIYWLPLTEEQAAQRAAARAERMREREKRRKEMEEEDKKREEERRE
RMKTGGAAGGEGERDRDRERDRDRGREREREGDKRKEGYRRPGGNSASGSRRSRSRSDPP
PRDRRH
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctagacgggaggccgctccattcgctccgggtagcg
gatttaaaggcggcattggaagagagagggcttccaaaaagcggacagaagaatgctctc
gtcaagaggcttaaaggggctctcatgttggagaaccttcagaaaacctccactcatcac
attggcctgcaacctaactcccggattggggaggaaatgagtcagaacagcttcattaaa
cagtacctggccaaacagcaagagcttctcaggcagcgcttggagagagaagcacgagag
gcagctgaaactgatggaacagaccatgaagaccacacagaggccaatgacaatgtttgt
gctgtcactaaccaggatgttgctccctccttagttgatcaacacaaaggaggtacagca
gtagctgggggatttggaaatgagagtgatgagctgagagaaaaagaaacacctgggcag
ccgtccccctccgcacctgcacaggctggcgcaatagcctctttatcggtgagggttgtt
ggtgaaagaggaccaacttcaagccatgtagctgctgacagtgatgatgacagtgaaggt
ggggatgacaatgatgatgaggaggaggagtggaacgccaaagctcaacggagtcgtcga
gcacagccttcaagaagccaaccggtgagggaaagatctggtggctcgcagcaacagcag
cagccgcccccccaacacatacctttactatcacaacagcttagacagccaactcctccc
ccatcccctcctcctgaactctcttttcccctcccagacacccctaaacagagcccccct
agtcccggggagcccccatctaggcagcgcatatctagctcttcaagctctggtagttcc
agtagtgacagtcgtagcagtagccctgaaccagcaggcgactcctcagagcgcagacca
ggcccactgaccttactggcacgcaagatggagtctgagggagctttctctggagcagga
aagcgtgatagggagggaatggacggacagagaagccaccatgagggaggtgtgtccgca
attacccacacagctaatgcagcatccgttttgtcataccctagttcagtgatctccaac
caaggtgttagtgtcgtcaggtcagcagtggtggaagcgagtgatggcgtgaagctgaaa
gaaaacaaaaagagggaaaggcaacgagaacaagagaggctgaaagccttagaaaaggag
agagaggaaaaggcattggtagaagagcgagcaaaagttttggaacgggaaagacaggaa
cgagaagaagctctgaaacgtgagagggctttacagcgagaaagggaagagaaagaaaag
gcattacagcgggagagagaagagagggaaaggcttgaacgagagcaggctttggaaaga
gagcgcctcgagagagaacaagctctggaacgagagaggcaagagaaggagagactggag
agagaaaggcaagaagctttagagcgggagagggtggagagagagaggctggagaaagaa
agacaagaacgagaacaagccttagagcgggacaggcttgagagagagagactcgagaaa
gaaagacaagaacgagaacaagccttagagcgggagaggcttgagagagagagacaagaa
cgagaacaagccttagagcgggagagacttgagagagaaagactcgagaaagaaagacgt
gaacgagaacaagccttagagcgggagagacttgagagagaacgacttgagaaagaaaga
caagaacgagaacaagccttagagcgggagagacttgagagagaaagactcgagaaagaa
agacgtgaacgagaacaagccttagagcgggagagacttgagagagaacgacttgagaaa
gaaagacaagagcgagaagaagctctagagagggagagattggagaaagagcggcttgag
aaggaaagactagaacaagaagaagctctagagagggagagattggaaagagagcggctt
gagaaggaaagacaagaacgagaagaagctctagagagggaaaggttggagaaagagcgg
cttgagaaggaaagacaagaacgggaagaagctctagagagggaaaggttagagaaagag
cggcttgagaaggaaagacaagaacgagaagaagctctagagagggaaaggttggagaaa
gagcggcttgagaaggaaaggctagaacgagaacaagctctggagagggagagattggag
cgagaacggcttgaaaaggaaagacaagaacgagaagaagctctagagagggagcgtttg
gaaaaagagcggcttgagaaggaaagacaagaacgagaacaagctctagagagggagcgg
cttgagaaggaaaggcaggaacgagagaagcaagaaaaagaacaagctctagaaagggag
agacaagagaaagaaaggcaggaaagagagcaagctttggagagacaagagaaagaaagg
caggaaagagagcaagctttggagagagaaagactggaaaaagaagctgctttggagaaa
gagagacaagaaatggagagggccaaagaacaggaaaggctggagaaagagagggctttg
gaaaaagaaagagaagctgctctggaacgcgagaggcaagagcaagaaagacttgagaaa
gagaaagctttggaagaagaacggttgcaaaaagaacaagctcttgagcgtgagagagaa
gcacagaggaaagcagaggaggaacgagagcgagctttggaaaaagaaagagaggagcag
gagagggctttaagagaagagcagcagagagccttggaagaaagggggagacttttggtg
caaaaaagagtgcaggaggaaaaagaaaaggctttgaagcatgaaaaagaggaggaacgt
gagaaagaaagagaaagccgtcttcctccgttgaagcgtggtcgtgatatcggtggtctc
tcttgtccagcggcccaacctgcttctcaggagagtccatcggggaagcccgatgagagt
gagactggtgaaccgcagagcactggcaaagatgctctatctacagagcctgtcccacaa
caatcacccacacctgcaacaccactatcccctcagtcttcttcaaagaagtcccgcttc
ctcagagatgctcctgcgacaactcctctccaatcctctccaacttctgtgctgaagaga
cctcgtactttctcagacaacccgatgccacaagccccctcagttccgttagcatctaag
ccaaaggaagatgctcctcaaacatcatcaggccttgtttcagcaccccatgagcctgag
agcaagatccctgaggtgtctgcccaacaacaggcaccaaaagaggaagagaagatggag
acatcaaaggatagtgaggcaagcaaggacactaaacgtaagacactcagaagagtggag
gatgaagagaaaccttctttacctcctccagaggagaagaaaagaggaagagaaaaggaa
aagaaagaagtggggaagaaagaaagaaattcatcatcctccagcgattcctcctcatcc
gactcggattctgggtcttcatcctcctcacgctcctccagttcatcatcatcagaggag
gatgagaaaagtcgttccacttcaggtggtaggaagactaaagaagtccataaagattct
tcatctcaggccacagaaaaagttggtcaaactgtggctgaaaagcctcctacagcccag
cgcaaaaaacgagtcttcacagagcaagaggagaaagacatgggcaatgaggatgtcatc
caaaccaagaaaccctgccttgaactacaagatgagacagtaacaaggggaagaaaggac
gatattgacgaagatgacactagcaaagacactaccagtgaagtgaaggaggccgtcatg
gcggagcctgaaaaggttccagagagcattgaggagagcactacgccaaagaccttctct
gcccgaaggatttctctcggcagcagcaaacagtctcctggggtggtgagttcggagggg
gaagcggaggccgcaagcagtgctggcgctggcaggaagaggagatggggctccagtaca
gctgtcactgccaagaaaccctccatcagtatcaccactgactctttgaagtctttaata
ccagacatcaagcctgccttgggtcaggaggctgtgttagacctgcatccagaggagatg
catctctctggggaggaggaaggaggagagaggggcgaccaagacttgaaaattagacga
actgtaacacaggttgtgtcatctgacacacaagagaatggacagaaagaatccaaaaga
agtgaacctgaggatgaggaacaaagaagtgaagggcaggatagacttagccaggaggaa
aaaatggaaggctccattcaggtttccatggaaacggagccgttgtcccctgggcgagac
gttgatatgaagacagtcactcccagtgacacactgattcgacgttccattagccagcag
aagtcgggcgtgagtataaccatcgatgacccggtccgcacagccaaacagccctctcct
cctcgtggaaagctgtctaacattgtccatgtctgcaacctggtgaggccgtttaccctg
gggcagttgaaggagttgttgaaccgcacagggactgtagtggaggaagatttctggatt
gacaagattaaatctcactgttacgtcacatactctagtgcagaagaggcgatggccact
cgtacagcactacatggggttaaatggccccaaagtaaccctaagttccttagtgttgat
ttctgctcgcaagaggagttggacttccacaggggtttgggtccagcaggagaaaagcca
acagaggagcctcgtggggcggcagccactgggcctggccgttcagtacctctgcctctc
ctaccggagcgtgatcagtgggcagaacgagaacgggaaatggaaaggagggagagaacg
cgtgcagagagggaatgggacagagataaagtgagagacttcagcaaacctggagaggag
cgggaagctggggccaaaagatcacgttcacgagatcgcgagaggcggcgcaaggaaaga
ggcaagagcaaggagagaaaaacagataagaaggaaaaaggaccagaggatccacctgcc
aaactgctggatgacctcttccgcaaaaccaaagcggctccatgcatctactggctcccc
ctcactgaggagcaggcggcacagagggcagcggctcgtgccgagcgcatgagggaaaga
gagaagaggaggaaggagatggaagaggaggataagaaacgtgaggaggagcggcgagag
aggatgaagaccggcggggccgccggaggggaaggtgagagagaccgtgacagagaacga
gaccgagacagaggtcgggaaagggagcgagagggggataaacgaaaggagggataccgc
aggcctggcggaaacagcgcaagcgggagcaggaggtcacgaagccgcagcgaccctccg
cccagagatcgacgacactaa
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