Garra rufa (doctor fish): 141344952
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Entry
141344952 CDS
T11039
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141344952 (mib1)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141344952 (mib1)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141344952 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
Motif
Other DBs
NCBI-GeneID:
141344952
NCBI-ProteinID:
XP_073705950
LinkDB
All DBs
Position
10:38659676..38739298
Genome browser
AA seq
1089 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGTFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVAAGAEGGSSQFMVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPAGSAVTNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKTSGQVGSRSPSLNSNNETLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVMCCGGKGMEDATDDEDLRFEYADAAERTNNVQELEDFSEEQQAAELLRANK
GLINNDHKTNTIVDHPGNNTVLRFKAGGSNSMAGGSQDLLQPNNLALSWSSGNIPALQRD
KDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQLCGDRMSECPICRK
AIERRILLY
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggtaggaataaccgagtcatgatggaaggcgtgggtgctcgagttatccgc
gggcctgactggaagtggggtaaacaggacggaggggaagggcacgtcggcactgtcagg
agttttgagagcccggaggaagtggtggtagtgtgggataacggcaccgccgccaattac
cgctgctccggagcttatgatgtgaggatattagacagtgcacccacaggaatcaagcat
gatggcaccatgtgtgacacctgtcggcagcagcccatcattgggatccgatggaaatgt
gcggagtgcaccaactatgacctgtgcaccacatgttaccatggtgataagcaccacctg
cgccacaggttctaccgcatcacgactcctggtagtgagagagttcttttggaatctcga
cgcaagtcaaagaagatcaccgcccggggcatctttgcgggaggacgggtggtgcgagga
gtggattggcagtgggaggatcaggatggcgggaatggaagaagagggaaggtgacagag
atccaggactggagtgcggccagcccccacagcgcagcctacgtcctctgggacaacggg
gccaagaacctctaccgagtgggattcgagggcatgtctgatttgaaatgtgtgcaagat
gccaaaggaggcactttttacagagaccactgtccagtgttgggtgagcagaatggaaac
aggaacccaggaggcctgcagattggagatttggtcaacatcgatttggacctggagatt
gttcagtcgctgcagcatggccacggaggctggactgatggaatgtttgaaacgctcacc
accacaggcactgtgtgtggcattgatgaagaccatgacattgttgtgcagtatccaagt
ggaaacaggtggacgtttaacccagcggtgctcacaaaggcaaacgttgtacgtagtgga
gaggtggcggctggtgctgagggaggcagctctcagttcatggtgggagacttggtccag
atctgctatgacattgaccgcatcaaactactccagagaggacatggagagtgggctgaa
gctatgctgccaacccttggaaaggtgggaagagtacaacagatttactctgacagtgac
ctcaaagtcgaggtgtgcgggacatcctggacatacaatccagccgctgttactaaagtg
gctcctgctggatctgctgttactaatgcttctggagagcgcctgtctcagcttctcaag
aagctttttgagacgcaggagtcgggagacattaatgaagagctggtgaaggccgcggct
aatggcgacctagccaaagtagaggacatcctgaagagacctgatgtagacgtgaatggg
cagtgtgcaggacatactgccatgcaggcagccagccaaaatggccatgtggacgtcctc
aaactgctgctgaaacataatgtggacctggaggctgaggataaggatggagaccgagct
gtccatcatgcagccttcggggacgaaggttctgtcattgaggtgctgcatcgaggtggg
gctgacctgaatgccagaaacaaacgcagacagacgcctctgcacatcgctgtcaacaag
ggccacctacaggtggtgaagactttgcttgactttggctgccaccccagtctgcaggac
tcagagggagacacacctctgcatgatgccatcagcaagaagagggatgacatgctctct
gtgctcctagaagcaggtgcagatgtcacaattaccaacaataacggcttcaacgcgctt
caccatgcagctctgcgagggaaccccagtgccatgcgtgtgctgctatccaaactgcca
cgaccatggatagtggatgagaaaaaggatgatggttacaccgcgcttcacctggctgcc
ctcaacaaccacgtggaggtggcagagctcctagtccaccagggaagtgccaatttggac
atacagaacgtcaaccagcagacggcactgcatcttgctgtagaacgtcagcacacccag
atagtgcgactcttggtgcgagctgaggcaaagttagacgtgcaagacaaggacggagat
acgccactgcacgaggccctgcgtcaccacactctgtctcagctgcgccaacttcaggac
atgcaggatgtcagcaaagtggagccctgggagccctccaaaaacacattaattatggga
ctgggcactcagggggctgagaagaagagtgcagcttctattgcttgcttcctggcggcc
aatggagctgacctcaccatccgtaacaagaagggccaatctcctctggacctgtgccct
gaccccagcctctgcaaggcccttgctaaatgccacaaagagaagactagtgggcaggtt
ggctcccgtagcccgtctctaaacagtaataatgagactcttgaggaatgcatggtgtgc
tctgatatgaaaagggacactctttttggcccctgtggtcatatcgctacctgctctctc
tgctcgccacgtgtcaagaagtgtctcatttgcaaggaacaggtccagtccagaaccaag
attgaggagtgtgtggtttgctctgataaaaaggcagctgtgcttttccaaccctgtggt
cacatgtgcgcctgtgagaactgtgccagcctgatgaaaaaatgtgtacagtgtcgggcc
gtggtggagcgccgcactcccttcgttatgtgctgtggagggaaaggtatggaggatgcc
actgatgatgaggaccttaggttcgaatatgcagatgctgctgaaagaacaaataatgtg
caggagctggaggatttttctgaagaacagcaggcagctgaactgcttagggccaacaag
ggactcataaacaacgatcacaaaacaaacacaatcgtggatcatccaggaaacaacaca
gtattaagattcaaggcagggggctctaactcaatggcaggggggtcacaggatcttctc
cagcccaacaatctggcactaagttggtccagcggaaatatcccagccttgcagagggac
aaagacaacactaatgtcaatgcagacgtacagaagttacagcagcaactgcaggatatc
aaagagcagactatgtgtcccgtgtgtctggatcgcctaaagaacatgatcttcatgtgc
ggtcatggcacctgtcagctctgtggagaccgaatgagcgagtgccccatctgccgcaag
gccatcgaacgccgcatcctactttactag
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