Garra rufa (doctor fish): 141345440
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Entry
141345440 CDS
T11039
Symbol
prdm10
Name
(RefSeq) PR domain zinc finger protein 10
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141345440 (prdm10)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
141345440 (prdm10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
SET
zf-C2H2_2
zf-C2H2_6
Zf-C2H2_ZNF451
Zn_SUZ12
zf-C2H2_7th_ZNF462
zf-met
DUF7381
zf-Di19
DUF629
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
141345440
NCBI-ProteinID:
XP_073706394
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Position
11:3003730..3043355
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AA seq
1177 aa
AA seq
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MEAKQESSPVWSPTPNNDTGNTPQVHFETSAVAQIVYSGEQSDRTQQQVVYAADGSSYTS
VESAEHTLVYIHPADGTQAVFTDQPQVAYIQQDGTTQQVTVLLPSGQNMNTANLHVLSNV
ADGPQAILEPVTQSQLAVTNAALPNMPEASSSPLGATDSTVDSEDEEEDNDSDDSEMDDW
EPRTPQPFTPQNLWCEDCNNANSGACLKHGPLHPILNRPVMSKARASLPLILYIDRFLGG
VFTKRRIPKRTQFGPIEGPLVRQSELQDTHIHLKLYMLDPEKEGERAQDLWFDLSDEERC
NWTMFVRPAQNHLEQNLVAYQYGSDIFYTTIKNIQPKQELKVWYAASYAEFVNQKIHDVT
DEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNMHDDKLNLIQRPKGRGRGRGRKRFGA
ARRPGRRTKFICPQTPVESADKTQELLASVDKLPFEERTDGALNGLKVVEMPAESMETET
EEGLDTPAIHTEALQDEGESVTPPPPTEVLESAKEDLPQTSPEDTHLTPQDMRRARRIRN
AALQHLFIRKSFRPFKCSQCGKAFRDKDKLDQHMRYHGRDGCRHMCLQCGKGFLTNTALV
DHLQLHADQRTYSCLFCAESYDRLDLLKVHVGVHLVNGCFSCPSCKKTFTDFIQVKKHVR
SFHSEKIFQCKECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHN
PEREAKKADRIHRTKALKQKEPTTDFESFMFKCRLCMMGFRRRGMLVNHLSKRHPEMRLE
EVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPD
PMLSTHTQLTGTIATAPVCCPHCAKQYSSKTKMVQHIRKKHPEYQYNSSSSIQAPLATTV
ISSTPAVITTDGTTAEAVVTTDLLTQAMTELSQTLTTDYRTAQGDFQRIQYIPVSQAGGG
LSQPQHIQLQVVQVAPASSPHSQHSTVDVSQLHDPHSYSQHSIQVQHIQVAEPTGTVQAN
AQVSAQPLSPSSQQAAQELSSAQLTPVTLAQGQTLQTSTNQTQGAAQHAYLPSNWNYRGY
PSEIQMMALPHTQYVIAEASTPVTAAVNSSQVKTTHYVISEGQTELDGKQVNVQSTAAQV
HPDPLEQPAVSQQTTTQYIITTTTNGTGASEVHITKP
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaagcaggagtcatcacctgtgtggagtccaacacccaacaatgacactgga
aatacacctcaggttcattttgagaccagtgcggtggctcagatcgtgtacagcggagag
cagtctgaccgcactcagcagcaggttgtctatgctgcagacggaagctcctatacctcc
gttgagtctgccgaacacacactggtgtacatacacccagccgatggaacgcaggcggtg
tttacagatcagccccaagtggcctacattcagcaagatggcacaacacaacaggtgact
gtgttgctaccgagcggtcagaacatgaacactgcaaatctgcacgtattgagtaacgta
gctgatggcccacaggcgattctggaacctgtgacacagagccaacttgctgtgactaat
gcagctcttcccaacatgccggaggcctcgtcgagtcccctgggggccacagattccact
gtggattcagaggatgaggaagaagacaacgatagcgacgattctgaaatggatgattgg
gaacccaggacgccccagccgttcacccctcagaacctctggtgtgaagactgtaataat
gctaattctggagcatgtttaaaacacggccctctgcaccccattctgaaccgccctgtg
atgtccaaggctcgggccagtcttcctctcatcctgtatatcgaccgcttcctgggtgga
gtcttcaccaagaggcgtatccccaaacgcacacagttcggacctatagagggaccactg
gtgcgacagagcgaactgcaggatacacacatccatctgaaattatacatgctggaccct
gagaaagagggcgagagggcacaggacctctggtttgacctgtctgatgaggagagatgt
aactggacgatgtttgtccgaccggcccagaaccacctggagcagaacctggtggcttat
cagtacggatcggacattttttacaccaccattaagaacattcaacctaaacaggagctt
aaggtgtggtatgctgcatcatatgccgagtttgtcaaccagaagattcatgatgtcaca
gatgaagagagaaaagttttacgtgagcaggagaagaactggccgtgttatgagtgtaac
agacggttcatgagctcagagcagcttcagcagcacttaaacatgcacgacgacaaactg
aacctcatccaaaggccgaagggccgtggccgaggacggggcaggaagcgattcggcgcc
gcgaggcgaccaggacgacgtacgaaattcatctgtccacagactcctgttgagagtgcc
gacaagacacaggagctgttagcgtctgtagataaactaccgtttgaggaaaggacggac
ggagcgctcaacgggctgaaggtggtggaaatgccagccgaatcgatggagactgagaca
gaagaagggcttgataccccagctatccacactgaggcgctgcaagacgaaggggaatct
gtcaccccaccaccgcccacagaagtcctggagtctgccaaagaggacctgcctcagaca
agtcccgaagacacccacctcacaccgcaggacatgaggagggcgaggaggattaggaat
gccgctctccagcatctattcatccgtaagtcctttcgaccctttaaatgttctcagtgc
gggaaagcctttcgagataaagacaagctggaccagcacatgcggtaccacggccgggac
ggctgccgtcacatgtgtcttcagtgcggtaagggcttcctgacgaacacagcgcttgtg
gatcacctgcagttgcacgccgatcagcgaacatactcctgcctcttctgcgccgagtcc
tatgacagattagacctgctcaaagttcacgtgggggttcacctggtcaacggctgcttt
tcctgtccttcctgcaagaaaaccttcacagacttcatacaggtaaagaaacatgtaaga
agcttccactcagagaagatctttcagtgtaaagagtgtgataaagccttctgcagacct
gataaacttcgactccacatgcttcgccactctgaccgcaaggacttcctgtgctccacc
tgtggaaaacagtttaagaggaaggataaattacgggagcacatgcaaaggatgcacaac
cctgaacgtgaggccaaaaaggcggaccgcatccaccgcaccaaagctttgaaacagaag
gagcccaccacagacttcgagagctttatgtttaaatgcagactctgtatgatgggcttc
aggagacgagggatgctggtgaatcacctgtctaaacgacatcctgagatgcgactggag
gaggttcctgagctgacgctgcccatcattaaacccaacagagactacttctgccagtac
tgtgataaggtgtataaaagtgccagtaagaggaaggcccacattttgaagaaccatcct
ggagcagaattgccccccagcattcgaaagctgcgtccggctgggccgggagagcctgac
cccatgttgagcacacacacgcagctgaccggcaccatcgctactgcaccagtgtgctgc
ccgcactgtgccaaacagtacagcagcaagacaaagatggtccagcacatccgaaagaag
catccagaatatcagtacaacagcagcagcagcatccaggcaccactggccactactgtc
atcagcagcacccctgctgtcatcacaacggacggcactactgcagaggctgtggtgacg
actgacctgctgacccaggccatgacggagctgtcccagaccctgaccacagactaccgc
acagcacaaggggatttccagaggatccagtacatcccagtgtctcaggcaggaggaggt
ctgtctcagccgcagcacatacagctgcaggtggtgcaggtggccccggcgtcctctcct
cactctcagcactctacagtagatgtgagtcagttacacgaccctcacagttacagtcag
cactcgattcaggttcagcacattcaggtggctgagcccacggggacagtgcaggccaat
gcacaggtgtcagctcagcctctaagtccctcctctcagcaagctgcccaggagcttagc
agcgcccagctgacccctgtgacccttgctcagggccagactctacagacgtccaccaat
cagacgcaaggtgctgcacaacatgcgtaccttcccagcaactggaactacaggggttat
ccatctgagatccagatgatggctcttcctcatacccagtatgtgatcgcagaggccagc
acccccgtcactgccgccgtcaacagcagtcaggtcaaaacgacacactatgtcatctca
gaaggacagacggagctggatggtaagcaggtgaacgtccagtccaccgcagcgcaggtt
caccccgacccgctggagcagccggccgtcagtcagcagaccaccacgcagtacatcatc
accaccaccaccaacgggacgggagccagtgaagttcatatcaccaaaccctga
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