Garra rufa (doctor fish): 141345441
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Entry
141345441 CDS
T11039
Symbol
cdon
Name
(RefSeq) cell adhesion molecule-related/down-regulated by oncogenes
KO
K20033
cell adhesion molecule-related/down-regulated by oncogenes
Organism
grf Garra rufa (doctor fish)
Pathway
grf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
141345441 (cdon)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
Y_Y_Y
DUF7359
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
141345441
NCBI-ProteinID:
XP_073706395
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Position
11:3269309..3318544
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AA seq
1126 aa
AA seq
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MEDSGLRLLSAVLCVCHTLLLNCPSVLCLSFRVEPLSVVQKQGSVVHLRCTARPATARIS
WLFQGQPLDPSHQSGVELGPGSLSLSSLQPALTGSYQCLAQSETGTIISRHAQVRIADIE
GFAETHRRTFTVNKGDTAVIECPLPRSNPPALPRFRIRGKWLEQSTDEYLILPSGNLQIV
SVSSEHQGMYKCGASNPLTRETQVEAHGTKLIVKDSESPSPVRIVYPVTPRNLTVDQSGS
LTLECVVSVSLSSKVKWIKDGSELSLSSKFMLLQSNLILNDAQLSDGGHYCCSVLTDRGA
VVSVNYTVNVLAEVSVLQGLSDQAVTVGSSVRFTCAASGSPTPNITWLLNSTPLTSSPRL
QIAGSSLHISSVMVQDQGIYQCLFDNGISSAQSAGSLSVQSEPQSSSMSGAPMEIQPSIH
PVQSDEGDELFPSTGEEGTGEMIGLPTERSSDKPTPEAPIIISPPQTHKPNMYDLEWRAG
RDWGIPINAYFVKYRKVDDMGNVVGNWHTVRVPGSEKSLPLSELEPSSLYEVLMVARSAA
GEGQPAMLTFRTGKERTSSNKNPSKAPIVSLPEKTQEDKTTNTYYGVVIHDRVPEAPDRP
TISMATESSVYVTWIPRANGGSPITAFRVEYKKQGRSGDWIIAADNISPLKLSVEVRNLE
PGSTYRFRVIAMNNYGESPASATSRPYQVSLSNPPVSNRPITGPHISSTDAVSDTQIMLR
WTYTPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGFKFWHLIGQLQPETSYDIKMQC
FNDGGESEYSNVMICETKARQPPGVPSQRPITPPGFYPADTPSQPGGLLYLIVGCVLGVM
VLILLVFIVMCLWRNRQQHSLHKFDPPSYLYQPAEMNGHVLEYSTLPGSSHLNGSVHTGC
GHTAPMMPQTCHHLHHKLPNGLALLNGSGGLYPPGHPHAHDTSLPHNTMEYDHPHPHHLH
NGGGIYTALPQNDSSDCMSCQNFCNNNRCYTKTNGTFTAGTLPLMHRVAARQPDGLEMMP
LNPVLSRCHGRDSPQLNGSLERDPAEEAEEGKAPPFSQNSPCLPVETKSTLEQQRGVQLV
QHEDLEGPVVCWERLGLPDLDCKEKTAWISTGSLTGDLIQPTVQEI
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtggcctgagattattgtccgctgtgctatgtgtctgtcataccctgctc
ctcaactgcccatctgtcctgtgtctctcttttcgtgtggagcctctctctgtggtacag
aagcagggcagtgtggtccacctgcgttgcacagcgcgtccagccaccgccagaatcagc
tggctgtttcagggtcaaccgctagaccctagtcaccaatctggagtggagcttggtcca
ggctccctctcactgtcatctctccaaccagctctcacgggctcctaccagtgcttggct
cagtctgagacgggcaccatcatcagccggcacgcacaagtgcgcattgcagatattgag
gggtttgccgagacccatcggaggacatttactgtaaataaaggcgacactgctgttatt
gaatgcccacttcctcgcagcaatccacctgcgctgccacgtttccggatacgggggaaa
tggctggaacagtctacagacgagtatttaatcctgccctccgggaaccttcagattgtg
tcagtgtcttcagaacatcagggcatgtataagtgtggtgcttctaatcctctaacccga
gagactcaagtagaggctcatggcactaaactcatagtcaaagattcagaaagcccttcg
cctgtaaggatcgtctatcctgtcacccctcgcaatcttacagtggaccaatctggatct
ctgacccttgagtgtgtcgtatcagtaagcctttcttcaaaggttaaatggattaaagat
gggtcagagctttcgttgagctccaaatttatgttgttgcaaagcaacctgattttaaat
gacgcacaactgagtgatggaggacattattgctgctctgttctgactgaccgtggagct
gtggtcagtgtcaactacactgtgaatgtgcttgcagaagtaagtgtcctgcaaggtttg
tcagatcaggctgtgactgtgggctcctctgtgagatttacctgtgctgccagtggtagt
ccaacccccaacattacatggcttctcaactccacccctctcacatcttcaccccgcctc
caaatcgctggctcttcccttcacatctcttcagtaatggttcaagatcagggaatctac
caatgcctgtttgacaatggaattagctctgcacagtcggcaggaagtcttagtgtccaa
tcagaaccccagtctagttccatgtctggagctcctatggagattcagccttctatccac
cctgtccagagtgatgaaggtgatgaactgttcccctccactggggaggaagggactggt
gaaatgataggactgcccactgaaagaagcagcgacaaacctacaccagaagctccgatc
ataatcagcccgccgcaaacgcacaaacccaacatgtatgatctagaatggcgagcaggt
cgggactgggggatccccatcaatgcatacttcgttaaataccgcaaggtggacgacatg
ggtaatgtggtggggaactggcatacggtgcgggtgccaggcagtgagaagtctctgccc
ttgtctgagcttgagccatccagcctgtatgaggttctgatggtggcccgcagtgctgca
ggagagggccagcccgcaatgctgactttccgcacaggaaaggagaggacttcctccaac
aagaacccctccaaggctccaattgtgtctcttccagagaaaacacaggaagataaaacc
actaacacttattatggagtggttatacatgacagagttcctgaggccccagaccgccca
actatctctatggctacggaaagctctgtttatgtcacatggatcccacgagccaatggt
ggctctccaatcacagcctttcgtgtggaatacaagaagcaaggccgaagtggtgactgg
atcatcgcggctgataatatctcaccgctgaaactgtctgtggaagtgcgtaacttggaa
ccaggttccacatatcgtttccgtgtcattgccatgaacaactatggtgaaagtcctgct
agcgccacctccaggccataccaggtctccctgtcgaatccacccgtctcaaaccgtcca
atcactggccctcacatctcttccactgacgctgtcagcgatactcagatcatgttacgc
tggacttacactccctccagtaataacaacacccccatccagggattctacatctactat
cggccaacagacagcgacaatgacagtgattacaagagagatgtggtggaaggcttcaaa
ttctggcacttgattggtcagctccaacccgagacgtcgtacgacatcaagatgcagtgc
tttaacgacggcggcgagagcgaatatagtaacgtcatgatctgcgagaccaaagcccgt
caacctccaggtgtgcccagccagcgccccataacccctccaggcttttaccctgcagat
acacccagccagccgggcggcctgctctacctgatcgtgggctgtgttctgggagtcatg
gtgcttattctgctggtcttcatcgttatgtgcttgtggaggaaccgtcagcagcacagt
ctgcataaattcgatcctccaagttacctgtaccagcctgcggagatgaacggccatgtt
ctggaatattccacgttgcctggctccagccatctaaatggaagcgtgcacacgggctgt
ggtcacaccgctcccatgatgccccagacctgccatcacctccaccacaaactgcccaac
ggcctggctttgctgaacggatcaggaggcctctaccctcctgggcatccgcatgcacat
gacacctctctgccccacaacaccatggagtacgatcacccacaccctcatcaccttcat
aacggtggagggatatacacggctctgccccaaaacgactcgtcggactgcatgagctgt
caaaacttctgcaacaacaacaggtgttacacaaaaaccaacggcactttcacggccggc
actctccctctaatgcaccgcgtggcagcgcgccaacccgacgggctggaaatgatgccc
ctcaaccccgttttgtctcgctgccatggacgtgacagcccacagctcaacggctccctg
gagagagatccagccgaagaggcagaggagggcaaggctccacccttttcccagaattcc
ccttgtctgccagtggaaacaaagtccaccctcgagcagcagagaggagttcagctcgtg
cagcatgaagacttggagggtcctgtggtgtgttgggaacggctgggactgcctgatctg
gactgtaaggaaaaaacagcctggatctctactggaagcctgactggagatctcatccag
cctaccgtgcaggagatctga
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