Garra rufa (doctor fish): 141345472
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Entry
141345472 CDS
T11039
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141345472 (irf2bp1)
04121 Ubiquitin system [BR:
grf04121
]
141345472 (irf2bp1)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
141345472 (irf2bp1)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Atypical E3
141345472 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
141345472
NCBI-ProteinID:
XP_073706423
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All DBs
Position
11:complement(8925735..8929622)
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AA seq
620 aa
AA seq
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MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPSGKHGPAGKEGPMEAGRPPSERYERGRGEYVSARLPNGLPRLEDGGP
PEVSRQSPTARRTLVGAVPPNLMAQGLVGAPHGLLTAMPGLNARAGGAPLTISAPMLNEL
SKRQAIGMGMNVGVASFMSPEFEKEFKEKQRNAEALAELSESVRNRAEDWAGRPKHMREA
LHGLSGCTPFNVRFKKDHGLVGRVFAFDAKLMVELELKVFIEYPCGSGNVFSSVLALVKQ
MFHDSQKDTGKVINSGFKYVEYEKRHGTGDWRLLSELLSDGVRAFKDAPAPESLPQPYLD
PSCSMLPSALCHIGRPTQPRVRRRKASPEPDGAERMTSEEMRQHWPLGVYPGLPGHMPAT
SLASVGQPPEGMGAHGSDPSPISALMSVADNVGTATQSPKDAPGASGGHSANAGRQNSAS
PSPAGSQRRLASRNGEPSVGSSAGGPTTTVTASLIDQGAVMGGEGSGGAGGAGGAPLCCT
ICHERLEDTHFVQCPSVPGHKFCFPCTRDFICRQGSGNEVYCPSGEKCPLVGSNVPWAFM
QGEISTILAGDVKVKKERDP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcatcttccaggcggcaatggtgctacctttgcgacctgcca
aagatgccgtgggccatgatttgggacttcagcgaggccgtgtgcagaggctgtgtgaac
tacgagggcgcggacagaatagagttgctcatcgacacggcgcggcagctcaagcgaaca
catgtgatgcaggacggcagatctccgggtccgcagcccagcggtaaacacggtcccgct
ggcaaggagggtcctatggaggccggcagaccgccctccgagcgatatgaacggggaagg
ggagaatatgtgtctgccaggctgcccaatggactgcctagactggaagatggaggtccg
cccgaggttagtagacagagtccaactgccaggaggactttagtgggggctgtgccaccc
aatttaatggcgcaagggcttgtcggagcccctcacggcctgctgaccgccatgcctggt
ctgaatgcccgagccgggggtgcccccttgaccatttccgctcccatgttaaatgagctc
agtaaaagacaggccataggcatggggatgaacgtgggtgtggcgtctttcatgagccca
gaatttgaaaaggagttcaaggagaagcaaaggaacgctgaagcactcgctgagctgtcc
gaaagcgttcggaaccgtgcggaagactgggctggacgccccaaacacatgcgtgaggcc
ttgcacggcctttctggttgcaccccattcaatgtccgctttaagaaagaccacggcctg
gtgggaagggtgtttgcttttgacgccaagctgatggttgagttggagctgaaggtcttc
atcgagtacccgtgcgggtccggtaacgtgttctccagcgtattggcgctggtcaagcag
atgttccacgactctcagaaagacactggcaaggtcattaactcggggtttaaatacgtg
gagtatgagaaaaggcacggtaccggcgactggcgcctcctgtctgagcttctcagcgat
ggagtgcgggctttcaaagatgcgccggcaccagaatctcttccgcagccttacctggac
cccagctgctccatgttacccagtgcgctctgccacatcggccgtcccacgcaacccaga
gtacgcaggcgcaaagcctcgcccgagccagacggtgcagagaggatgacctctgaggag
atgcgccagcactggccgcttggagtgtatccgggcttgcccggccatatgcccgcaact
tcgctagccagcgtgggacagcctccagagggcatgggggcacatgggagcgacccgtcg
cccatctcggcgctcatgagtgtagccgacaatgtcggcacagccacccagtcccctaaa
gatgctccaggcgccagcggaggccactcagccaacgcagggcggcagaacagcgcaagc
ccttcacccgcaggcagtcagcggcgactggcgtcgcgcaacggagaaccgtcggtgggc
agtagcgcaggaggaccgaccacaacggtcactgcatccctcattgaccagggtgccgtt
atgggaggtgaaggctcaggaggagccggaggtgccggcggtgcccctctgtgctgcacc
atctgccacgagcgcctggaggacacacacttcgtccagtgtccgtccgtgcccgggcac
aagttctgcttcccttgcactcgggacttcatctgcagacagggctcaggaaatgaggtg
tactgccccagtggagagaagtgccccctcgtgggctccaacgtgccgtgggccttcatg
caaggcgagatctctacgatcctggcgggtgatgtgaaggtgaagaaggaacgagacccc
taa
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