Garra rufa (doctor fish): 141345494
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Entry
141345494 CDS
T11039
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141345494 (hnrnpul1)
03400 DNA repair and recombination proteins [BR:
grf03400
]
141345494 (hnrnpul1)
Spliceosome [BR:
grf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
141345494 (hnrnpul1)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
141345494 (hnrnpul1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SAP
AAA_17
AAA_18
KTI12
SRP54
Motif
Other DBs
NCBI-GeneID:
141345494
NCBI-ProteinID:
XP_073706448
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All DBs
Position
11:complement(23178654..23195679)
Genome browser
AA seq
772 aa
AA seq
DB search
MMSLDVKKLKVNELKEELQKRGLDTKGLKVDLVERLQAALEAEKEPTCNDETEAGVAEAG
NDECSDQGQMAGEKEGSNMNRSVSEIHKDGNKPEATVETICKEEHEVAPVKVKNEDDIKT
ELQEQQQPYPGSEWEDQESRQSAVSKSEQDGHARYGHKRRYDESHGYSYYEHREDRRSRS
PLPPAEEDEEDFDGTLVVIDTYNCDLHFKVSRDRCSGYPLTIEGFAYLWSGARATYGVNK
GRMCYELKVMEHIPVKHLPSSEPDPHVVRIGWSLDSCSTQLGEEAFSYGYGGTGKKSACC
KFEDYGEKFGESDAIGCYIDFDSHEQVQMAFSKNGKWLDVAFHISKEELDGRALYPHVLL
KNCSVEFNFGQREEPFFPLQDGYTFIGAVNLENRVRGTVGPANKSDCEVLMMVGLPACGK
TTWASKHAEMNPEKKYNILGTNAIIEKMKMMGLRRQRNYAGRWDILIQQATQCLNRLIQI
AARKRRNYILDQTNVYGSAQRRKMHPFEGFQRKAIVICPTDEDLKERTYKQTHEEGKDVP
DHAVLEMKANFVLPEVGDFLDEVTFVELQREKAEELVKLYKEEGRKAGPPPEKRFDNWGQ
RRRESSYQRYDNHGGSRGGQQNRGGPERSYRGGYNRDGYNQNRWGGHYRDGRDGYSSSHQ
SRGSYNNNRHGSYNKEGYNQSYHQGYNQGYNQGNYNQGNYNQGYNYGNYNQYPDCGQGYH
DNQGSGQSYNQQDYNQQYQQYAQQWQQYYQNQSQWNQYYGQYGNYSGQQGSQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtctggacgtgaagaaattgaaagtgaacgagctgaaagaagagttgcagaag
cgtgggctggacaccaaaggcctcaaagtggatctggttgagcggcttcaagcggctctg
gaggctgaaaaggaacccacctgcaatgatgagacagaagcaggtgttgcagaggctggg
aatgatgagtgttctgaccaagggcagatggctggtgagaaagagggctctaatatgaac
cgcagtgtatctgaaatccataaagatggaaataaaccagaggcaactgttgagacaatc
tgcaaggaggaacatgaagtggcaccagtgaaggtaaaaaatgaagatgacataaagacg
gagctacaagaacagcagcaaccttaccctggcagtgaatgggaagaccaggagagccgg
caaagtgcagtgagcaagtctgaacaggatggacatgcacgttatggccacaagaggcgc
tatgatgaaagccatggttatagctattatgaacaccgtgaagacaggaggtcccgctca
cctctgccacctgctgaagaggatgaggaagactttgatggcacgcttgtggtcattgac
acttataactgtgacttgcacttcaaagtctctcgggaccgttgcagcggctatccttta
accatcgaggggtttgcttacctatggtctggagcacgagcaacgtatggtgtaaacaag
ggacgcatgtgctatgagctgaaggttatggagcatataccagtgaagcatcttcccagc
agtgagcctgaccctcatgttgtgagaatcgggtggtctctggactcctgcagcacacag
cttggagaagaggcattctcttatgggtatggcggaacagggaaaaagtctgcctgttgc
aaatttgaagattacggagagaaatttggtgaaagtgatgccattggatgttatattgac
tttgacagtcacgagcaggtgcaaatggctttctcaaagaacggaaagtggcttgatgtg
gcatttcacatatctaaagaagaactggatggtcgtgcgctatatcctcatgtcctgctg
aagaactgctctgttgagtttaactttggtcagcgagaggaacctttctttcctttgcaa
gatggctacacgttcattggggccgtcaacttggagaacagggtcagaggaactgttggt
cctgccaacaaatctgattgtgaggtcctgatgatggtcggtcttcctgcttgtggtaaa
accacgtgggcctctaagcatgcagagatgaacccagagaagaagtacaacatcctgggc
acaaatgccatcattgaaaaaatgaagatgatgggattgcgacgccagcgaaactatgct
gggcgctgggacatcctgattcagcaagctactcagtgcctaaaccgactgatccaaatc
gctgcccgcaaaagacggaactacatcttggatcagacaaatgtatacggatcagcccag
agacgaaaaatgcatccttttgaagggtttcaacggaaggctattgtaatttgtcccaca
gacgaggatttaaaagagcgaacgtataagcaaactcacgaggaaggaaaagatgtgccc
gatcacgctgttttagaaatgaaagccaactttgtgctgccagaggttggagacttcctg
gatgaagtgacctttgttgagctgcagagagaaaaagctgaagagctggtcaaactgtac
aaagaagaaggccggaaggccgggcctccgcctgagaaacgctttgataactggggacag
cgtagacgtgaaagcagctatcaacggtacgacaaccacggagggtcgagaggaggacaa
cagaaccgtggaggacctgaaagaagctacagaggaggatataaccgtgatggctacaat
cagaaccgctggggaggtcattacagagacgggcgagatggatacagcagcagccatcaa
tctagaggaagctacaataataaccgtcatggctcctataacaaagaaggatataaccaa
agctatcatcagggttacaatcaaggctacaaccagggcaactataaccagggaaactac
aaccaaggctacaactatggcaactacaaccagtacccagattgtgggcaaggttaccat
gacaatcaaggatctggacaatcatataaccagcaggactacaatcagcagtatcagcag
tatgcgcagcagtggcagcagtattatcagaatcagagccagtggaaccagtactacggt
caatatgggaattactccggacagcagggctcacagtaa
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