KEGG   Garra rufa (doctor fish): 141345494
Entry
141345494         CDS       T11039                                 
Symbol
hnrnpul1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1
  KO
K15047  heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:grf03041]
    141345494 (hnrnpul1)
   03400 DNA repair and recombination proteins [BR:grf03400]
    141345494 (hnrnpul1)
Spliceosome [BR:grf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    141345494 (hnrnpul1)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     141345494 (hnrnpul1)
SSDB
Motif
Pfam: AAA_33 SAP AAA_17 AAA_18 KTI12 SRP54
Other DBs
NCBI-GeneID: 141345494
NCBI-ProteinID: XP_073706448
LinkDB
Position
11:complement(23178654..23195679)
AA seq 772 aa
MMSLDVKKLKVNELKEELQKRGLDTKGLKVDLVERLQAALEAEKEPTCNDETEAGVAEAG
NDECSDQGQMAGEKEGSNMNRSVSEIHKDGNKPEATVETICKEEHEVAPVKVKNEDDIKT
ELQEQQQPYPGSEWEDQESRQSAVSKSEQDGHARYGHKRRYDESHGYSYYEHREDRRSRS
PLPPAEEDEEDFDGTLVVIDTYNCDLHFKVSRDRCSGYPLTIEGFAYLWSGARATYGVNK
GRMCYELKVMEHIPVKHLPSSEPDPHVVRIGWSLDSCSTQLGEEAFSYGYGGTGKKSACC
KFEDYGEKFGESDAIGCYIDFDSHEQVQMAFSKNGKWLDVAFHISKEELDGRALYPHVLL
KNCSVEFNFGQREEPFFPLQDGYTFIGAVNLENRVRGTVGPANKSDCEVLMMVGLPACGK
TTWASKHAEMNPEKKYNILGTNAIIEKMKMMGLRRQRNYAGRWDILIQQATQCLNRLIQI
AARKRRNYILDQTNVYGSAQRRKMHPFEGFQRKAIVICPTDEDLKERTYKQTHEEGKDVP
DHAVLEMKANFVLPEVGDFLDEVTFVELQREKAEELVKLYKEEGRKAGPPPEKRFDNWGQ
RRRESSYQRYDNHGGSRGGQQNRGGPERSYRGGYNRDGYNQNRWGGHYRDGRDGYSSSHQ
SRGSYNNNRHGSYNKEGYNQSYHQGYNQGYNQGNYNQGNYNQGYNYGNYNQYPDCGQGYH
DNQGSGQSYNQQDYNQQYQQYAQQWQQYYQNQSQWNQYYGQYGNYSGQQGSQ
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgatgagtctggacgtgaagaaattgaaagtgaacgagctgaaagaagagttgcagaag
cgtgggctggacaccaaaggcctcaaagtggatctggttgagcggcttcaagcggctctg
gaggctgaaaaggaacccacctgcaatgatgagacagaagcaggtgttgcagaggctggg
aatgatgagtgttctgaccaagggcagatggctggtgagaaagagggctctaatatgaac
cgcagtgtatctgaaatccataaagatggaaataaaccagaggcaactgttgagacaatc
tgcaaggaggaacatgaagtggcaccagtgaaggtaaaaaatgaagatgacataaagacg
gagctacaagaacagcagcaaccttaccctggcagtgaatgggaagaccaggagagccgg
caaagtgcagtgagcaagtctgaacaggatggacatgcacgttatggccacaagaggcgc
tatgatgaaagccatggttatagctattatgaacaccgtgaagacaggaggtcccgctca
cctctgccacctgctgaagaggatgaggaagactttgatggcacgcttgtggtcattgac
acttataactgtgacttgcacttcaaagtctctcgggaccgttgcagcggctatccttta
accatcgaggggtttgcttacctatggtctggagcacgagcaacgtatggtgtaaacaag
ggacgcatgtgctatgagctgaaggttatggagcatataccagtgaagcatcttcccagc
agtgagcctgaccctcatgttgtgagaatcgggtggtctctggactcctgcagcacacag
cttggagaagaggcattctcttatgggtatggcggaacagggaaaaagtctgcctgttgc
aaatttgaagattacggagagaaatttggtgaaagtgatgccattggatgttatattgac
tttgacagtcacgagcaggtgcaaatggctttctcaaagaacggaaagtggcttgatgtg
gcatttcacatatctaaagaagaactggatggtcgtgcgctatatcctcatgtcctgctg
aagaactgctctgttgagtttaactttggtcagcgagaggaacctttctttcctttgcaa
gatggctacacgttcattggggccgtcaacttggagaacagggtcagaggaactgttggt
cctgccaacaaatctgattgtgaggtcctgatgatggtcggtcttcctgcttgtggtaaa
accacgtgggcctctaagcatgcagagatgaacccagagaagaagtacaacatcctgggc
acaaatgccatcattgaaaaaatgaagatgatgggattgcgacgccagcgaaactatgct
gggcgctgggacatcctgattcagcaagctactcagtgcctaaaccgactgatccaaatc
gctgcccgcaaaagacggaactacatcttggatcagacaaatgtatacggatcagcccag
agacgaaaaatgcatccttttgaagggtttcaacggaaggctattgtaatttgtcccaca
gacgaggatttaaaagagcgaacgtataagcaaactcacgaggaaggaaaagatgtgccc
gatcacgctgttttagaaatgaaagccaactttgtgctgccagaggttggagacttcctg
gatgaagtgacctttgttgagctgcagagagaaaaagctgaagagctggtcaaactgtac
aaagaagaaggccggaaggccgggcctccgcctgagaaacgctttgataactggggacag
cgtagacgtgaaagcagctatcaacggtacgacaaccacggagggtcgagaggaggacaa
cagaaccgtggaggacctgaaagaagctacagaggaggatataaccgtgatggctacaat
cagaaccgctggggaggtcattacagagacgggcgagatggatacagcagcagccatcaa
tctagaggaagctacaataataaccgtcatggctcctataacaaagaaggatataaccaa
agctatcatcagggttacaatcaaggctacaaccagggcaactataaccagggaaactac
aaccaaggctacaactatggcaactacaaccagtacccagattgtgggcaaggttaccat
gacaatcaaggatctggacaatcatataaccagcaggactacaatcagcagtatcagcag
tatgcgcagcagtggcagcagtattatcagaatcagagccagtggaaccagtactacggt
caatatgggaattactccggacagcagggctcacagtaa

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