Garra rufa (doctor fish): 141345523
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Entry
141345523 CDS
T11039
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141345523 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141345523 (nup93)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141345523 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
141345523
NCBI-ProteinID:
XP_073706486
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Position
11:complement(32427133..32457980)
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AA seq
820 aa
AA seq
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MDTEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDTADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRDSMLVQWEQVKQRVLHTLLGAGEDALDFSQEVEPSFASEVGVPGRSALDS
VEVAYSRQIYIFNEKIVNGHLQPNLGDLCASVAESLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRVSVDMQMAFVRQALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVCSFLNI
KLPTPLPGMQDGEVEGHPVWALIYFCLRCGDLSAAMQVVNRAQHQLGDFKIWFQEYMNSP
DRRLSPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIGDNHGEVADKTEDYLWLKLN
QVCFDEDGSSSPQDRMTLAQLQKQLLEDYGESHFSASHQPFLYFQVLFLTAQFEAAIAFL
FRVERLRSHAVHVALVLYELKLLLKSSGQSAQLLSLEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVASEAENKGLFEEAVKLYELAKNPDKVLELINKLLSPVIAQVSEPQSN
KERLKNMAVAIAERYRTNGVAGEKSVDSTFYLLLDLMTFFDEYHTGHIDRAYDVIERLKL
VPLSQNSVEERVAAFRNFSDEIRHNLSEVLLATMNILFTQYKRLKGAAAGTPGRPQRSLE
DRDMLLRSQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatactgagggcttcggggaactcctgcagcaggcagaacagctcgcagcagagact
gaggctgtgtccgagctgccccatgtagagcgaaacctacaggagatccaacaggctgga
gagcgactgcgttcccgcactctcaccaggacctctcaagacacagctgacgtaaaagcc
tccattctcttgggctctcggggtcttgacatcttccatatctctcagcgtcttgagagt
ctcagcgctgccactacctttgagcctcttgagccagtcaaggacactgatattcagggc
tttctgaagaacgagagagacaatgcactgctgtcagccatcgaggaatcacgccgcagg
acatttctgctggcggaggagtaccacagagactctatgttggtgcagtgggagcaggtg
aagcagagagtgttgcacaccctgctgggagctggagaggatgcactggacttcagccaa
gaagtggagcccagtttcgcgagtgaggtcggagtaccaggacgcagtgcactggacagt
gtggaagttgcctacagccgacagatctacatcttcaatgagaagatagtaaacgggcat
cttcagcccaacctgggagatctctgtgcctccgtagctgaaagcctggatgataagaat
gtatcggacatgtggctcatggtgaagcagatgactgacgttctgttggtgccagcaaag
gacacgctgaagagtcgagtgtctgtggacatgcagatggccttcgtcagacaagccctg
cagttcctggagaacagctataaaaattacactatggtcactgtatttgggaatctgcac
caggctcagttgggcggagtacctggcacttatcagctcgtatgcagcttcctgaacatc
aagctaccaaccccgctgccaggcatgcaggacggcgaggtggagggacatccagtgtgg
gctctgatctatttctgcctgcgttgcggagacctgtctgctgccatgcaggtggtgaac
agggcacagcatcagctgggcgactttaagatctggtttcaggagtacatgaacagcccc
gaccgacgtttgtctcctgccacagagaataaactacgacttcattatcgacgagtgctg
aggaacagtgccgacccctacaaacgcgcggtctactgcctcatcggcaaatgcgacatc
ggcgacaatcatggagaggtagccgataagacagaagactacctgtggctcaagctcaat
caagtgtgttttgatgaggacggcagcagttcccctcaggacagaatgactttagcccaa
cttcagaaacagctactggaggactatggtgagtcccatttctcggccagccaccagcca
ttcctgtacttccaggtgcttttcctgactgcacagtttgaggcggccatagcgttcctt
ttccgagtggagcgtctgcgcagccatgccgttcacgtagctctggtgctgtacgaactc
aaattgctgctcaaatcatcaggccagagcgcacaactcttgagtctagaggctggagat
cctccaatggttcgacgtctcaactttatcagactgcttatgctctacactcgcaagttt
gagtccacagatccacgagaggccctgcagtacttctacttcctccggaatgagaaggac
agtcaaggagaaaacatgttcatgcgctgcgtcagcgagctagtcatcgagagtcgggag
ttcgatatgcttcttggaagacttgaaaaagatggaagcaggaagcctggcgtgattgac
aagtttgctggagacacgcgggccatcattaccaaggtggcctcggaggccgagaacaag
gggttgtttgaggaggccgtcaaactgtacgagttagccaagaatcctgataaggttttg
gagctgattaacaaattgttgagtccggttatcgctcaagtcagcgagccccagtccaac
aaagagcgactcaaaaacatggcagtggctattgccgagcggtaccgtactaacggtgta
gctggggagaaatctgtggacagcaccttctacctgcttctggacctcatgacgttcttt
gacgagtaccacaccggacacatagaccgagcctacgatgtgattgagaggttaaagctg
gttcccttaagtcagaacagtgttgaggagcgagttgcggccttcagaaacttcagtgat
gagataagacataatttgtcagaggttctgctggccacaatgaatatcctgttcacacag
tacaagcggctaaaaggagctgcagccggtacgccaggaagacctcagcgttccctagag
gacagagacatgctgctgcgcagtcaagcccgggctctgatcacgtttgcgggaatgatt
ccgtatcggatggctggagataccaatgccagactggttcagatggaggtcctaatgaac
tga
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