Garra rufa (doctor fish): 141345655
Help
Entry
141345655 CDS
T11039
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141345655 (hcn4)
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
141345655 (hcn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
141345655
NCBI-ProteinID:
XP_073706643
LinkDB
All DBs
Position
11:46539574..46689858
Genome browser
AA seq
1152 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQKAFIMGDAEDTDKDTRRKSIRMKPLPSGESADTRSGESA
IMETDIGRPVKTSSNGDCRRFRGSLSSITSRHLHDSDVAEERRLITEGEFTPSEESPPGA
AGGSADSAGGGGGSEGEDTAGASQQQQQQQQQPGVPDQQAGFIKLEGIEQILPDDERYYQ
AGFMHRQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTML
LLMVGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNAEIILDP
QQIKIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLR
LSRLIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCW
VSKNKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFV
GHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEESIL
GELNEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGK
KMYFIQHGVVSVLTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFN
EVLEEYPMMRRAFETVALDRLDRIGKKNSILQHKVQHDLNSGVLNYQENEIIQQIVQHDR
DMAHCANLMQSPSPPPPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPATLFRPP
VSVLGSRNEPSARLKRYQTVAPKSSGDSPSGSPSKIRPGVDTPLLASLRMQHSSSTTSSS
QQAGISLFPFEGFSSSSASPTSSTAQLHPQPRQKQAVAPSTPSQSGRLQPSTTSSNTSPL
STGLFSHAPSQLLHGQPPPKPSQTGSLQQFATGGGKTSTGLNLFHTPPPGSPASTRSQAP
ETSTSSHIPPALSTYLPLERSALASLAQYGSANASPCYTPLAPSPTIQSPVTARTFHYSD
PSSAAGSHSSLLLPQSSCPGQLPGHHSSGTDSPLGRFYEDLNILSSSHPIEAAGQSSPRE
PGYCLSPYSSPTLTPKPCSSVSGHMASPVQTSPGSRGQAHSIGTSPALSLPRASDRRPSE
LEPLRSKLPSNL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttgcattcgtccatgcgtaaaaggctctacagtttgccacagcacatcggg
cagaaagcgttcatcatgggagatgcagaagacaccgacaaggacacccggaggaagagc
atccggatgaagcccctgccgtcgggggagagcgcggacacccgaagcggagagtccgcg
atcatggagacggacatcgggagacctgtgaagaccagctccaacggggactgccgaagg
ttccgaggcagcctttcgtccatcaccagtcggcacctccacgactcggatgtagcggag
gaaaggcgtctgatcacggaaggagaattcaccccgagcgaggagagccctcctggagcc
gcgggtggcagcgcggactcagctggcggcggtggcggcagtgagggtgaggataccgcc
ggtgcgagccagcagcagcagcagcaacaacaacaaccgggtgtcccggatcagcaggct
ggctttataaagctggagggcatcgagcagatcctgccggacgacgagaggtattatcaa
gcgggcttcatgcacaggcagttcggggcgatgctgcagcccggggtcaacaagttttcc
ctgaggatgtttgggagcgagaaggcggtggaacgggagcaggaacgggtcaaatccgcc
ggcttctggattattcacccctatagtgatttcaggttttactgggatctcaccatgctg
ctcctgatggtgggaaatctcatcatcattcccgtgggcatcaccttcttcaaggacgag
cacacgccgccgtggatcgtcttcaacgtggtttcagacaccttcttcctgatggacctg
gtgctgaacttccgcacaggaatcgtgaaggaggacaatgcggagatcattctggaccct
cagcagatcaagatcaaatatctgcgctcatggttcgtggtggacttcatctcctccatc
ccggtggactacatcttcctcatcgtggagacgcgcatcgattcggatttctacaagacg
gcgcgcgctctgcggatcgtacgcttcaccaagatcctcagtctgttgcggctgctgcgg
ctctcgcgcctcatacgctacattcatcaatgggaggagatttttcatatgacctacgac
ctggccagcgcaatggtgcgaatcgtcaacttgattggaatgatgctgctgctctgtcac
tgggacgggtgtctgcagttcctggtgccgatgctgcaggatttccccgccgactgctgg
gtgtctaagaacaagatggtgaatgacacgtggggtcagcagtattcgtacgctctgttc
aaggccatgagccacatgctgtgtatcggatatggcatgtaccctcctgtcggcatgaca
gacgtgtggctgaccatcctcagcatgatcgtgggtgcgacctgctacgccatgttcgtc
ggccacgccacggcgctgatccagtcgctggactcctcgcgcaggcaatatcaggaaaag
tacaagcaggtggagcagtacatgtccttccataagctgccagcggacatgagacagcgg
atccacgattactacgagcacagataccaggggaagatgtttgatgaagagagcattctg
ggagaactgaatgagccactaagagaggagatcataaacttcaactgtcggaagctggtg
gcgtctatgccgctgttcgccaacgcggatccgaattttgtgacgtcgatgctcaccaaa
ctccgcttcgaggtcttccagcctggagattacatcatacgagaaggaaccattggaaag
aagatgtacttcatccagcatggcgtggtgagcgtcctcaccaaaggaaacaaggagacc
aagctgtcggatgggtcctactttggagagatttgtctgctgactcgaggcagacgaacc
gccagcgtccgggccgacacgtactgccgtctgtactcgctttctgtggacaacttcaac
gaggtcctggaggagtatcccatgatgagaagagcgtttgagaccgttgccctggaccgt
ctggaccgcatcggaaagaagaactccattctccagcacaaagtccaacatgacttgaat
tcaggggttttgaactaccaggaaaatgagatcatccagcagatcgtgcagcacgatcga
gacatggctcactgcgccaacctgatgcagagtccgtcgccgcctcctcctccgtcccct
actcccgtcatctgggctcccctgatccaagcacctctacaagccgctgccgcgaccaca
tcggtcgctattgcactaacccaccacccccatctacccgcaactctcttccgacctccg
gtttctgttctggggtcaagaaatgagccatccgcccggctgaagagatatcagacggtc
gcaccaaaatcaagcggagactctccatccggttccccatcaaagatacgtccaggagtt
gatacgcctcttctcgcatccctacggatgcagcactcatcaagcaccaccagttccagc
cagcaagctggaatttcattgttcccattcgaaggcttctcttcgtcgtcagcttcgcca
acttctagcaccgcacagcttcatccgcagccaagacaaaagcaagccgtcgcccccagc
actccttcacaatcaggtcgtctccaaccatctacaacctcttcaaatactagccctctt
tcaacaggcttgttcagtcatgcccctagtcagttgctccatggccaacccccaccaaaa
ccctctcaaacaggctccctgcagcagtttgccaccggagggggcaagacttcaactggg
ttgaacctcttccacactcctccacccggatccccagcttccactcgttcccaagcccct
gagacttccacatcatcccatattccacctgcattatccacataccttcctttggaaagg
tcagcgctggcctcgctcgctcaatacggctcagcgaacgcctcgccatgctacacccct
ctggcaccgagtccgaccatccagagccccgtcacggcgagaactttccactacagtgac
ccttccagcgccgccggctcccacagctctcttctccttccacagtcctcttgtcccggc
caactcccgggtcaccactcttccggcacggactctccgttgggccgcttttatgaggat
ttgaacatactgtccagctcgcatcccatagaggcagcgggtcagtcttcccctcgggag
cccggttactgcctctctccgtattcatccccgacgttaacccccaaaccttgtagctcg
gtatcggggcacatggccagccccgtacagacttctccgggctctcgaggccaggctcat
tctatagggacgtcacctgcactttctctcccgcgcgcctctgacagacgcccgtcggaa
ctggaaccgctccgttcgaaactcccttccaatttgtga
DBGET
integrated database retrieval system
