Garra rufa (doctor fish): 141345803
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Entry
141345803 CDS
T11039
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
141345803 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141345803 (fan1)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
141345803 (fan1)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
141345803 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
141345803
NCBI-ProteinID:
XP_073706826
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All DBs
Position
11:29353650..29365687
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AA seq
992 aa
AA seq
DB search
MESRRDKGSSSVRGSGRRLSVTKKKSQGVTCNGGGVASITSFFRNTPPCKLACPLCGQLV
PRYKINEHIDSQCENFLGEDHEDTLGVSDDKQKKITKSLSYGEVPRTDRKEKSPGQKDAA
DTSPYFKKNCAVKQDSSETNVQAKPVKTVGLGSLSSKLSRRVLRLSGESEMDRTCGKEET
CDAELSSSQKENCVKSLTCESKADGVGKNNTLPTKPAASNQPQVKNMEKSVTVLAESSRS
ADIYSSSLSSSRVLKRKSEELPKNDTNTTEAFVINKKSRYFQSKTENRQETNVKSDETEA
SSDVVPSTNKDIERNPNTTPANDSKALGVEKNSEGSEHQHTRQPYYLQNFRTILEAVLEN
KDDRMLFNEEDFSAIHTFQQLSVPSQMLYVRLFQRKLKWLLVSKLEYTEISSDLRPVIQE
LVTCGFLQTESELHDIQEVLDLLPAPELKNLAKTFHLGRGANGTQKQQLVEGLLQLGKQR
SLFGQNNTAGVILKRAKQAAGSCVRLCRRSRAVFSRVLLLFSLTDTLEEEEMAAGGQGQL
YTILLVNSGRLAFPEYTVHRSARLFEDRDDLIRYETAMRTLQDVIAAMQTGSWEDAHVLY
TTAKATWQEIKGSCDLSHQEQLPVFLRCFTVGWTYTRILSRGVEILQRLRRYEDAVDELK
DLLSQAVYCVDSRGRWWDRLALNLQQHLKQHEQAICAIRDGLNDPVVRTGHKLSLHQRAS
RMKESASLKKYRLLLRDLPTVHVQDVTHVTIRGQLFPHEGGMGKSVFLRAASEDEGTTEG
RGTMVMCSVEDLALEHYRTLGFDQGIHGEGSTFSTLVGLLMWDIIFVDGVPDVFRNPYQT
CPLDFHTDCFYENRRETIEARAEMLREASAETLQELLADVWNAQEGRTCAMINWERFSSL
QQAQSLVACLGGHFLSGVVLRMAKDYRHCRGGLPDLVVWSTSNKKYKLVEVKGPNDRLSQ
KQQIWLDELHKLGADVEVCHVTATGARGAQRN
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcggagagataaaggcagctcgtctgttcgaggcagtggcaggagactctca
gtgacaaagaaaaagagccagggggtcacatgcaatggaggtggggttgcttccataact
tcatttttcaggaatactccgccgtgtaaactggcatgtcctctttgtggccaacttgta
cctcgctacaagattaatgaacacatagattctcaatgtgagaatttccttggagaggat
catgaagatacactgggtgtcagtgatgacaaacagaagaaaataaccaaatcactctct
tatggagaagtacctcgaactgataggaaagagaaaagcccaggacagaaagatgctgca
gatactagtccgtattttaaaaagaactgtgcggtgaaacaagattcatctgaaacaaac
gtccaagctaaaccggttaaaacagttggacttggaagtttgtcgtctaaactgtctaga
agagtacttaggctttcaggtgaatctgagatggatcgtacttgtggaaaagaagagacc
tgtgatgcagaactgagtagctcacagaaggaaaattgtgtgaagagtttaacttgtgaa
tctaaagccgatggcgtgggtaagaataacacattgcccacaaagccagcggcctcaaac
caacctcaagtgaaaaacatggagaaatctgtgaccgtattggcagaatcgagcaggagt
gctgacatttactcttcatctttatcgtcatccagggtactaaagcggaagtcagaggag
ttgcctaaaaatgacacaaacactacagaggcctttgttataaataagaaaagtagatat
tttcaaagcaaaactgaaaacagacaagaaaccaatgtcaagtcagatgaaaccgaggcc
tcgtctgatgttgttccatccacaaacaaggatattgagaggaatcccaataccacacca
gccaatgattccaaagcacttggcgtagaaaaaaacagcgagggatcagagcatcagcac
accaggcagccgtattacctgcaaaactttcggaccatccttgaggcagtgttggagaat
aaggatgataggatgctcttcaatgaagaagacttctcagccattcacacctttcagcag
ctgtcagtacctagtcagatgctttatgtccgtctatttcaaaggaagctgaaatggctt
ctggtcagtaagttggaatacacagagatcagctcagacctcagacctgtcattcaagag
ctggtcacatgtggcttcttacaaacagaatctgagcttcatgacatccaagaagttttg
gatctgctgcctgcaccagagctcaaaaacctggccaaaacctttcaccttggtcgtgga
gcgaatgggactcagaaacagcagctggttgaggggctgctccagctagggaaacaacga
tcactttttggtcaaaacaacacggctggagtcattctcaagagggccaagcaggctgca
ggttcctgtgtgcgtctctgccgcaggtcacgtgccgtgttctcccgggtcctgctcctg
ttctctcttacagacactttggaggaggaggagatggctgctggaggtcaggggcagctg
tacaccattctgcttgtcaattctggccgtctagctttcccagagtatacggtacatcgc
tcagccagactgtttgaggacagggatgacctcatcaggtatgaaacagcgatgcgtaca
ctgcaagatgtgattgctgcaatgcagacaggaagctgggaggacgcccatgtcctctat
actacagcaaaggccacctggcaggagattaaaggctcttgtgacctgagccatcaagaa
caactgcctgtttttctgcgatgtttcaccgtgggctggacctacactcggatactgtct
cgaggagttgagattttacaaaggcttcgtcgctatgaggatgctgtggacgagctcaag
gaccttctgtcccaggcagtgtattgtgtagacagtagggggcgctggtgggacagactt
gctcttaatcttcagcaacaccttaaacaacatgagcaggccatctgtgctatccgggat
ggactgaatgaccctgtggttcgaacaggccacaaattgtcacttcatcagcgagcttcc
cgaatgaaagaatctgctagtttaaagaaataccgtctgctgctccgagatctgcccact
gtgcacgtacaggatgttactcatgtgacaattcgaggccagctctttcctcatgagggt
ggtatgggcaaatcagtgttcctcagagcggccagtgaggatgagggtaccacagaggga
cgagggactatggtcatgtgttctgttgaggacctggcactggaacactacagaacgctt
ggttttgatcaaggtattcatggagaaggctctacattttccacccttgttggactcctc
atgtgggacatcatctttgttgatggggttcctgatgtcttccgaaacccctaccagact
tgccctttggatttccacactgattgtttctatgagaaccggcgggaaaccatcgaggcc
cgtgctgagatgttgcgcgaggcgtctgcggagacattgcaggagctgctcgctgatgtg
tggaatgcccaggaggggagaacgtgtgcaatgataaattgggagcgcttctccagtctt
cagcaggcacagagtctagtggcatgtctgggtggccacttcctgagcggtgtggtcctc
agaatggcaaaggactacaggcattgcagagggggacttccagatctggtcgtctggagc
acatccaacaagaagtacaaactggtggaagtgaagggtcctaatgaccgtctgtcccag
aagcaacagatctggctggatgagctacataagcttggggccgatgtagaagtttgtcat
gtcactgccactggagcacgaggggctcaacggaattga
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