Garra rufa (doctor fish): 141345936
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Entry
141345936 CDS
T11039
Symbol
cpt1b
Name
(RefSeq) carnitine O-palmitoyltransferase 1, muscle isoform
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00071
Fatty acid degradation
grf01212
Fatty acid metabolism
grf03320
PPAR signaling pathway
grf04148
Efferocytosis
grf04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
141345936 (cpt1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141345936 (cpt1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
141345936 (cpt1b)
03320 PPAR signaling pathway
141345936 (cpt1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
grf03029
]
141345936 (cpt1b)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
141345936 (cpt1b)
Mitochondrial biogenesis [BR:
grf03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
141345936 (cpt1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
PANTS-like
Motif
Other DBs
NCBI-GeneID:
141345936
NCBI-ProteinID:
XP_073706958
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Position
11:complement(39941307..39960814)
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AA seq
770 aa
AA seq
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MAEAHQAVAFQFTVTPDGIDLQLSREVLKHIYISGVTSWKKRAIRFKNGVLTGVYPASPS
SWLIVVIAIMSTMYARIDPSMGMIDRIKTSLPVSEFMTVQTQTVLSAILFATGLWLSFIF
LLRYILKALLSYHSWIFESHGKMTFSTKVWLSLVKLLSGRRPLLYSFQASLPHLPVPSID
DTISRYLESVRPLLDDEQYKQMEIVANDFKKDPAPKLQKHLKLKSWWATNYVSDWWEEYI
YLRGRDPIMVNSNFYTMDFLYVIPTHRQAARAANVVHAMLQYRRKLERGELTPLRALGIV
PMCSFQYERMFNTTRIPGIETDFVQHLKDRKHLVVYHRGRFFKVWLYYGGRHLWPSELEM
QFQRILDDKSEPQPGEIKLPALTAGNRVPWARARLKYFYEGVNRSSLEAIETAAFFLTLD
DEAHGYDPENIRSLDLYAKSLLHGKCYDRWFDKSFNLIVYKNGKIGVNTEHSWADSPIIG
HMWEYVLATDSFHLGYTAEGHCKGDTNKSLAPPTRLQWDIPKACQEIIEGSYMIAKGIAD
DVDFHGCLFNEFGKGLIKKCRTSPDAFIQLALQLAQYRDKGEFCLTYESSMTRMFREGRT
ETVRSCTSESTAFVKAMEDKKTTNEQRLALFKKAADKHQNMYRLAMTGAGIDRHLFCLYI
VSKVMGIDSPFLKQVLSEPWRLSTSQTPQQQLNLIDMQKFPKYVGAGGGFGPVADDGYGV
SYIIVGENLITFHISSKFSSPETDSFRFGQNIRQAMLDIRALFNLKEKKM
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctcatcaggcggtggcatttcagttcaccgtcacaccggatggcattgac
ctacagttgagccgcgaggttctcaaacacatctacatatctggagtaacatcatggaag
aaacgtgccatccgcttcaagaatggggttctcacaggtgtgtaccccgccagtccctcc
agctggttaatagtagttattgcaataatgagcactatgtatgccaggattgacccctcc
atgggcatgattgacaggatcaagacatctctacctgtgagtgagttcatgactgttcag
actcagacggtgttgagtgccattctgtttgccacaggcctgtggttatcattcatcttt
ctgctgcggtacatcctgaaagctctcctgtcctatcacagctggatctttgagtcacat
ggcaaaatgaccttttctactaaagtctggctgagtctcgtaaagctgttgtctggtcgg
cggccattgctctacagctttcaggcatctctgccccatctgccggtaccgagcattgat
gacacaatcagcaggtatcttgaatcagttcgaccacttctggatgatgagcaatataaa
cagatggagattgttgcaaatgacttcaaaaaggaccctgcacccaaactccaaaaacac
ctcaaactcaaatcctggtgggccacaaattatgtaagcgattggtgggaggagtatatc
tacctgagaggacgggacccaatcatggtcaacagcaacttctacacgatggattttctc
tatgtgattcctacacacagacaggctgcacgagcagcaaacgtagttcatgccatgctg
cagtatcggcgtaagctggagcgaggagaacttaccccgctgagagctcttgggattgtc
cccatgtgctcttttcaatatgagaggatgttcaacaccacccgtattcctggcattgag
actgattttgtgcaacatctgaaggataggaagcacctggttgtgtaccatcgaggccgt
ttctttaaggtgtggttgtactatggtggtcgccacctttggccctcagagcttgagatg
cagtttcaacgcatcctggatgacaaatctgaacctcaacctggagagatcaaactccct
gcactgactgctgggaacagggttccctgggcaagggcccgtttaaagtacttctatgag
ggtgtcaaccggtcatctctggaggccattgaaacagctgcattttttctgaccctggac
gatgaagctcatggatacgatccagagaacatacggtccctagacctctacgccaaatca
ctactgcatggaaagtgctatgacaggtggtttgataaatccttcaatttaatagtctac
aagaatggtaaaatcggcgtcaacactgagcattcatgggctgactcgcctatcatagga
cacatgtgggagtatgttttagccacagactctttccaccttggatacacggcggagggg
cattgcaaaggagataccaacaaaagcctggcaccccctaccagactacagtgggacatc
ccaaaagcatgccaagagattattgaaggctcgtacatgattgcaaagggaattgctgac
gatgtggatttccacggctgcttgtttaatgagtttggaaagggcctgataaagaaatgc
agaacaagtccagatgcttttatccagctggcattgcagctagctcaatacagggacaaa
ggtgaattctgtctgacttacgaatcatcaatgacacggatgttccgcgagggccggacg
gaaaccgtacgctcgtgcacctctgagtccacagcgtttgtcaaagcaatggaggacaag
aaaaccacgaatgagcaaaggttagcactattcaagaaagctgcagataaacatcaaaac
atgtaccgtttggctatgacaggagccggaatcgaccgccatctcttttgcctctacatt
gtgtccaaagtaatgggcattgactcacccttcctcaaacaggttttgtcagaaccctgg
cgtctctccaccagtcagacccctcaacagcagctcaatctcatcgacatgcagaagttt
cctaaatatgtgggagcaggaggcggctttgggcctgttgctgatgacggttatggtgtt
tcttacatcattgtcggcgagaatctcattacattccacatttccagcaagttctccagc
cccgagacggactcgttccgctttggccaaaatatcagacaagccatgctggacataaga
gctctattcaacctgaaagagaagaagatgtga
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