Garra rufa (doctor fish): 141345989
Help
Entry
141345989 CDS
T11039
Symbol
tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
grf Garra rufa (doctor fish)
Brite
Enzymes [BR:
grf01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
141345989 (tsen34)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
141345989 (tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
141345989
NCBI-ProteinID:
XP_073707011
LinkDB
All DBs
Position
11:complement(5187291..5190199)
Genome browser
AA seq
314 aa
AA seq
DB search
MDGDPAGMNESQQPSNMEVKEDMETKNEIKHGLIDISFCGSTPLLWKVSDMKRCRSAGVT
GALVGSLARQPRQNVRLGRPLELLQEEALMLEETNTAAASLQTQDCGDEEAHLEAVRQYK
AGLESSYKEQSTLALEDKKTVLRRIMNEKENGTDDSGNAIRGRLNALDQAFRFPWSAMAV
QLCTARAGFSHCPEERSFHSTDWPMPRDERLNTRFCVYRDLRHKGFYLTSAGKFGGDFLV
YPGDPLRFHSHFIALCISMDEDLPLSDILAIARLGSNVKKTVLLCSPRSHGEAREDESVE
RDVVYSSLQWSSMV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatggagatccagcaggaatgaatgagtcacaacagccatcaaacatggaagtgaag
gaggatatggagaccaaaaatgaaattaagcatggtttgattgacatcagcttttgtgga
tccactcctctgttgtggaaggtgtcggacatgaaaaggtgccgatctgcaggtgtgacc
ggggctctggtgggctctctggcccgtcagcctcgacagaacgtgcggctgggcagacct
ctggagctcctgcaggaggaggcgctgatgctggaggagaccaacaccgctgctgcatca
ctgcaaacccaggattgtggagatgaggaggcgcatttggaggctgtgagacagtataag
gccggtctggagagcagttataaagaacagtccactctggccctggaggacaagaagacc
gtgctgaggagaatcatgaatgagaaggagaatggcactgatgactctggtaatgcaatt
agaggccgtcttaatgcactggatcaggccttccgcttcccatggtctgcaatggcggtt
cagctctgtacagcccgcgccggcttcagccactgcccagaggaacgcagtttccattcc
acggattggccgatgcctagagacgagcgcctgaacactagattctgtgtgtacagagat
ctgagacataaaggcttctacttgacctccgcagggaaatttggaggagatttcctggta
tatccaggtgaccctctgcgtttccattctcatttcattgcattatgcatctccatggat
gaagacttgcctctctccgatattctagcgatagctcgtctgggctctaatgtgaagaaa
acggttttgctttgctctccaaggagtcatggcgaggccagagaggatgagagtgtggag
agggatgtggtgtattcatcgctgcagtggagttctatggtgtaa
DBGET
integrated database retrieval system
