Garra rufa (doctor fish): 141346135
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Entry
141346135 CDS
T11039
Name
(RefSeq) zinc finger and BTB domain-containing protein 38-like isoform X1
KO
K10510
zinc finger and BTB domain-containing protein 38
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
grf01009
]
141346135
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141346135
04121 Ubiquitin system [BR:
grf04121
]
141346135
Protein phosphatases and associated proteins [BR:
grf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
141346135
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
141346135
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
141346135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
141346135
NCBI-ProteinID:
XP_073707150
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All DBs
Position
11:5683252..5705934
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AA seq
1255 aa
AA seq
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MTTRGHISLLPRSDRHLIAPTGTRGKTISIMRSGINKRQMTVVNPSTLGLVDSSHPQAVL
SHLSEQRSQGLFCDVIIVVEDVKFRAHRNILAATSGYFRNAFKVPEVYTSNQVLELTDLK
SEVFASILNFIYNARVESSSTEDSRSLVAAGKRLGIPFLEKLLDSERQSSSLLQGQASAS
CGRSNGQSKLADTCTLKKETLKPEELDCSKGPRITNAFSITEAEAVNNPFSTLEHRNKVI
EGLEEGHSSSSSQDTIISPIESEPANALTEHSYAVSQGQESKEVNQENNNRVRDNILPVV
TPSKTLVNHRLGPIKKRHIHCNGIPTLSSEPVATVPAITSKSAVEKAPVASLSSSQLSSD
AAPEILSSLDLDIAPSQDAEPPCLSPQNTPTFSCQQCPETFSDSSLLTIHMQIHKRFVSH
LFCKFCRKKFMHLKRLRNHEQVCVKSLKGPSELETNNKDSVRVPVSNGTSDANSTQHSLP
PPDLHAPLHLEPTLTSPLEMSQDQVKGTLKTNSTSRTYKCSVCKRAYVTLSSLKRHENVH
SWHRAYPCHYCNKVFALAEYRTKHEIWHTGERRYQCIFCLETFLTYYILKNHQKTFHGID
PQLAVNKKSANGGLKSSVYPIKLYRLLPMKFRKKRYKSYSHTYSEGMEGSDESYSALGSC
SPNALFDSSVPATNSDIVSGQSLFSMPVTFMATPKTMASETPRISFDKLRDQNVGFPVAS
EIDQPLKHLSDDFKKKSGFDGKGSPLFSYRFTESSKAIQKNTESSLMTRRSDSSTEKNAE
NSADILPFLNIPSVCSFEGLSKLSELSAAAQTIEDMANQLLQARPESITADQPPVGKTET
YIAKPACPGPSIDNQVLPLCQITVKIGNEAIVRRKIKGSKLFPKKRKRKSWRQEGIGQRS
PAEESIGSPSLRVRTEVTTAVTENESYDDPNDPETDKLWRPYYSYKPKKKSKKVKGKRMR
MKHLRSYTRPLSPEANDNFRETPFCPDERISADNYGVRREPRHSSQKEAFPCHSCESSFS
SQTSLSMHIISCHQPRCRICGKQCPPEDTSSTAGPTGEDSGDFICKSCTEDGSCFSSDVA
SPSLSMEKRYRCSYCPQRFLYLATKKSHEKKHLEKSGKGHSCRYCSKVCKSAVLLSVHES
KHFKAEDGEDQDVTSKISSSLSAGKERKGQIKPEPWESMYTSSETKPKMDIEAEVKYPTI
AGGYKKTSLSFPYAADRPFSPLSPEIKRKTSKKKSILERSKGYGFEDSVIWGQQD
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagggggcatatcagtttgcttcctcgctcagacagacatttaatcgcaccg
acagggaccagaggaaagacgatctcgattatgaggagcggtatcaacaaacgccagatg
actgtggtcaaccccagcactcttggtctggtggacagttcccacccccaggctgtcctc
agtcatcttagtgaacagcgttcacaaggcctattctgtgatgtaattatcgttgtggag
gatgtcaaattccgggcccaccggaacatactggctgccacaagtggatattttcgcaat
gctttcaaagtgcccgaggtctacacgtccaaccaggtgctggagctaacagacctgaag
tcggaagtctttgctagcatcttaaacttcatctacaatgccagagtggagtcaagtagt
acagaggacagcaggtctttggtggcagctgggaagcgtttaggaattccgtttctggag
aaattgctagactctgaaaggcagagctctagtctcttgcaaggccaagcctctgcaagc
tgcggaagatcaaacggtcaatcaaagttggcagacacatgcacactgaaaaaagaaacc
ctcaagcctgaggagttagactgctctaagggcccacggatcaccaatgctttctccatt
actgaggctgaggcggtaaacaacccattctctacactggagcaccgaaacaaagttatt
gagggacttgaggaagggcattcttcttctagctcccaagatacaatcatatcacccata
gagagtgagcctgccaatgccctaactgagcactcatatgcagtgagccagggacaagag
tctaaagaggttaaccaggagaataataacagagtaagagataacatcttgcctgttgtg
actccatcaaagactttggttaaccatagacttggacctataaagaagcgtcatatacat
tgtaacggtattccgactctctcaagtgagccggtcgcaaccgtgcccgctattacaagc
aaatctgcggtggaaaaggctcccgttgcttcattatcttcctcccagttgtcttcagat
gcagcaccagaaatactttccagtctcgatcttgacattgcaccctctcaggatgcagag
ccaccctgcctcagtcctcagaatacacccaccttcagctgccagcaatgccctgagacc
tttagcgactcgtcgcttctcaccatccacatgcaaatacacaagcgatttgtcagtcat
ttgttttgcaagttctgccgtaaaaagttcatgcatctgaaaagactgcgcaatcatgag
caggtttgtgtgaaatctctgaaaggtccatctgagttagagacaaataataaggactct
gtgcgagtcccggtctctaacggtacatctgatgcaaattccacacaacactctttacct
ccaccagatctccatgcccctttacatctagagcccacattgactagtccccttgagatg
tctcaggaccaagttaaagggaccttaaaaacaaatagcacttcaaggacttataaatgt
tctgtatgcaaacgggcttacgtgaccctctccagcctaaaaagacatgagaatgtacac
tcatggcatagagcctacccttgccactactgcaacaaagtttttgctctggctgaatac
cgcaccaagcatgagatctggcataccggggaacgccggtaccagtgcattttctgcctg
gagaccttcttgacttattacatcctcaagaatcaccagaagacctttcatggcatcgat
ccccagctggctgtcaataaaaaatcagcaaacggtggacttaagagtagtgtctacccc
ataaagctttacaggcttctcccaatgaagtttaggaagaaacgttacaagtcatacagt
catacatactctgaagggatggagggcagcgatgagtcctacagtgcactgggcagctgt
tcccccaacgctctttttgacagttcagtaccagcgactaactcagatattgttagtggt
cagtccttattttcaatgccagtgacgttcatggccactccgaaaacgatggcatcagaa
acgcctcgcatcagctttgacaaactccgtgaccaaaatgtaggatttcctgtggcgtct
gagatagaccagcccctgaaacacctctccgatgatttcaagaaaaagtctggatttgat
ggaaaagggtcaccgcttttcagctacagatttacagaatcttcaaaagcaatacagaag
aacacagagtcctctctgatgacacgcagaagcgattcttcaacagagaaaaatgcagaa
aatagcgcagacattcttccattcctcaatataccatcggtgtgctccttcgaagggttg
agcaaactgagcgaactctcggcagcagctcagaccatcgaggacatggctaatcagctg
ctacaagcaagacctgagagcataacagcagatcaaccgcctgttggaaagacagaaacg
tacattgctaagcctgcatgcccaggcccatcgattgacaaccaagttcttcccctctgc
caaataacagtgaaaattggcaatgaggcaattgttcgcagaaagataaaaggctcaaag
ctgtttccaaagaagaggaaaaggaaaagctggagacaagagggcataggtcaaagaagc
cctgcagaggagagcattggaagtccgagtttgagggtgaggacagaagtcacaactgca
gttacagaaaacgaatcctatgatgaccccaatgatcctgaaacggacaaactctggcgt
ccctattactcatacaaacctaaaaagaagagtaagaaagtgaaaggcaaacgaatgagg
atgaaacatctgagaagctacactaggcccttgtcaccagaagccaatgacaacttccgg
gagacgccgttctgtccagacgagaggatctcagcagacaactatggggtcaggagggag
ccaaggcatagcagccaaaaggaagctttcccctgtcacagctgtgagagctctttctcc
agccagacctccctcagcatgcacatcatcagctgccatcagccacgctgcagaatatgc
ggtaaacaatgtccccctgaagacacatccagcacagctgggcccactggagaggatagt
ggtgactttatctgcaagagctgcacggaggatggctcctgtttcagctcagatgtggca
tcccccagcctgagcatggaaaagcgttacagatgttcttactgcccgcagcggttcctt
tacctcgccaccaagaaaagtcatgagaaaaagcatctggaaaagtcaggtaaaggacac
agttgcaggtactgctcgaaggtgtgcaaatcagcagtgctgttgagcgtgcacgagagc
aagcacttcaaggcagaagatggagaagatcaggacgtaaccagtaaaataagcagttca
ctttctgccggcaaagagcggaaaggacagatcaagcctgagccttgggaaagcatgtat
accagctcagagaccaagccaaagatggacatagaagcagaggtgaaatatcctacaatc
gccggtggctacaaaaaaacatctttgtcatttccgtatgcagcagataggcctttcagt
cctctttctccagaaataaagaggaagacgtccaagaaaaaaagcattttggaacgatct
aaaggatatggatttgaggactctgtgatatggggacaacaggattga
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